Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb08g023170.1 |
Family | GT14 |
Protein Properties | Length: 426 Molecular Weight: 47139.8 Isoelectric Point: 7.1308 |
Chromosome | Chromosome/Scaffold: 8 Start: 55302062 End: 55305307 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 74 | 334 | 0 |
IAFLISGSAGDASALRRVLLALYHPRNRYILHLDAEAPDSDRTSLAADLASHPAIAAAANVRVVDRANLVTYRGPTMVANTLHAAAAFLWGHAGDGGSQW DWFINLSASDYPLVTQDDLIHVFSKLPRDLNFIDHTSDIGWKEFQRAKPVIIDPGLYMKKKADVFWIPQRRSVPTAFKLFTGSAWMALSRPFVEYCIWGW DNLPRTVLMYYSNFISSPEGYFHTVVCNADEFKNTTVNHDLHYISWDNPPKQHPHYLTVED |
Full Sequence |
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Protein Sequence Length: 426 Download |
MKPLAHSLHA AVDRRWLLPL AIGSALSLLL LVALTTFPSP FPSTSTPSSS SSLFVEHKLA 60 PTPPSPAAGS PPRIAFLISG SAGDASALRR VLLALYHPRN RYILHLDAEA PDSDRTSLAA 120 DLASHPAIAA AANVRVVDRA NLVTYRGPTM VANTLHAAAA FLWGHAGDGG SQWDWFINLS 180 ASDYPLVTQD DLIHVFSKLP RDLNFIDHTS DIGWKEFQRA KPVIIDPGLY MKKKADVFWI 240 PQRRSVPTAF KLFTGSAWMA LSRPFVEYCI WGWDNLPRTV LMYYSNFISS PEGYFHTVVC 300 NADEFKNTTV NHDLHYISWD NPPKQHPHYL TVEDLDRMVA SDAPFARKFH EDDLVLDKID 360 EEILGRGVDM PTPGGWCAGT RENGSDPCTM IGNTSLLQPG RGAVRLQRLI TLLLSEEKFH 420 PRQCK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-73 | 74 | 339 | 270 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 73 | 425 | 353 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS88559.1 | 0 | 52 | 425 | 49 | 425 | glycosylation enzyme-like protein [Triticum monococcum] |
GenBank | AAV49991.1 | 0 | 1 | 425 | 1 | 425 | putative N-acetylglucosaminyltransferase [Hordeum vulgare subsp. vulgare] |
GenBank | ACO87683.1 | 0 | 52 | 425 | 50 | 424 | b-1-3-galactosyl-o-glycosyl-glycoprotein [Brachypodium sylvaticum] |
EMBL | CAH05144.1 | 0 | 52 | 425 | 49 | 425 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Aegilops tauschii] |
RefSeq | XP_002442623.1 | 0 | 1 | 425 | 1 | 425 | hypothetical protein SORBIDRAFT_08g023170 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000004 | 88 | 295 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000004 | 88 | 295 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000004 | 88 | 295 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000004 | 88 | 295 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00001 | 88 | 295 | 99 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |