| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g002200.1 |
| Family | GT43 |
| Protein Properties | Length: 377 Molecular Weight: 40368.6 Isoelectric Point: 9.1541 |
| Chromosome | Chromosome/Scaffold: 9 Start: 2327797 End: 2333920 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 148 | 371 | 0 |
| LAHTLRLVRPPVVWVVVEPAADAPATAVVLRGTGVMYRHLAFKPEENFTTAEAEAHAQRNAALAHVEKHRLAGVLHFADAAGVYDVGFFDQIRQIEAFGT WPVATMLAGEKKVVVEGPLCSASKVVGWFSRDFNDGTTRSVTYNTEVDLNPAGAAGTRAHTIDVSGFAFNSSILWDPERWGRPTSLPDTSQDSIKFVQEV VLEDRAKLKGIPSDCSQIMVWQYS | |||
| Full Sequence |
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| Protein Sequence Length: 377 Download |
| MGTGALAVAA AAPADRANKQ RRAGGGAHLW KKALLHFSLC FVMGFFTGFA PSSSSSWKAA 60 TTTPHPPHRP GDRLAASRVA VDVNARATLP PPASAGDALG VGGATVDVGD EYEEGDANGQ 120 RRRLLIVVTT TRSGPGERRR RRGELLRLAH TLRLVRPPVV WVVVEPAADA PATAVVLRGT 180 GVMYRHLAFK PEENFTTAEA EAHAQRNAAL AHVEKHRLAG VLHFADAAGV YDVGFFDQIR 240 QIEAFGTWPV ATMLAGEKKV VVEGPLCSAS KVVGWFSRDF NDGTTRSVTY NTEVDLNPAG 300 AAGTRAHTID VSGFAFNSSI LWDPERWGRP TSLPDTSQDS IKFVQEVVLE DRAKLKGIPS 360 DCSQIMVWQY SVPSSQ* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 3.0e-33 | 149 | 368 | 231 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 8.0e-56 | 149 | 373 | 228 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 1.0e-88 | 22 | 376 | 365 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI93177.1 | 0 | 1 | 376 | 1 | 373 | glycosyltransferase [Saccharum officinarum] |
| RefSeq | NP_001054510.1 | 0 | 6 | 373 | 1 | 355 | Os05g0123100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105785.1 | 0 | 1 | 375 | 1 | 369 | beta3-glucuronyltransferase [Zea mays] |
| RefSeq | NP_001140833.1 | 0 | 1 | 376 | 1 | 365 | hypothetical protein LOC100272909 [Zea mays] |
| RefSeq | XP_002439203.1 | 0 | 1 | 376 | 1 | 376 | hypothetical protein SORBIDRAFT_09g002200 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.000000000004 | 127 | 369 | 7 | 230 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1v84_A | 0.000000000004 | 127 | 369 | 7 | 230 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1v83_B | 0.000000000004 | 127 | 369 | 7 | 230 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1v83_A | 0.000000000004 | 127 | 369 | 7 | 230 | A Chain A, Human Beta-Hexosaminidase B |
| PDB | 1v82_B | 0.000000000004 | 127 | 369 | 7 | 230 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL870509 | 201 | 177 | 377 | 0 |
| FL856198 | 201 | 177 | 377 | 0 |
| BJ256333 | 199 | 177 | 375 | 0 |
| FL770800 | 197 | 181 | 377 | 0 |
| FL917965 | 197 | 181 | 377 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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