| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g004030.1 |
| Family | GT14 |
| Protein Properties | Length: 422 Molecular Weight: 46767.8 Isoelectric Point: 8.9597 |
| Chromosome | Chromosome/Scaffold: 9 Start: 4485896 End: 4488715 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 73 | 325 | 0 |
| LAYLLIGARGDGRRLLRLLLAVYHPRNRYVLHLSADAPDDERLSLAAGVVAAAPAVGAFENVAVVGKPTAGTPVGSSGLAGTLRAAAVLLRLHADWDWFL TLNAADYPLVTQDDLIHVLSSVPRDLNFIDHMGDIESKEPEKVQQIIVDAGIYLSGRTNFFRGTQKRPAPEAFKFFTGSPWVILNRRFIEYCILAWENLP RILLMYFHNVIQPQEGYFQSVICNSLDFRNFTVNNDLRFMVRDDSAEAKPLFL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 422 Download |
| MGMGTARGAA GGWLPGERWR RVLFLALASV SFLISLILLF LSAPRLRLPS VVLPYTAAAA 60 SAVRRGPDAP PCLAYLLIGA RGDGRRLLRL LLAVYHPRNR YVLHLSADAP DDERLSLAAG 120 VVAAAPAVGA FENVAVVGKP TAGTPVGSSG LAGTLRAAAV LLRLHADWDW FLTLNAADYP 180 LVTQDDLIHV LSSVPRDLNF IDHMGDIESK EPEKVQQIIV DAGIYLSGRT NFFRGTQKRP 240 APEAFKFFTG SPWVILNRRF IEYCILAWEN LPRILLMYFH NVIQPQEGYF QSVICNSLDF 300 RNFTVNNDLR FMVRDDSAEA KPLFLSREHY GHMVDSGAPF ARPFQENDPL LDQIDSNILK 360 RWSHGTVPGA WCTGRKRWFS DPCSQWGDVN IVRPGPQAVM LQQYVNRTLE EAKSGSNSCR 420 R* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 1.0e-36 | 93 | 312 | 220 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 1.0e-99 | 67 | 420 | 354 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAU44151.1 | 0 | 44 | 421 | 20 | 406 | unknow protein [Oryza sativa Japonica Group] |
| DDBJ | BAH92951.1 | 0 | 44 | 420 | 20 | 399 | Os05g0152400 [Oryza sativa Japonica Group] |
| GenBank | EEC78537.1 | 0 | 44 | 421 | 50 | 430 | hypothetical protein OsI_18492 [Oryza sativa Indica Group] |
| RefSeq | NP_001130356.1 | 0 | 1 | 421 | 1 | 421 | hypothetical protein LOC100191451 [Zea mays] |
| RefSeq | XP_002439297.1 | 0 | 1 | 421 | 1 | 421 | hypothetical protein SORBIDRAFT_09g004030 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000000005 | 87 | 275 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000000005 | 87 | 275 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000000005 | 87 | 275 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000000005 | 87 | 275 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0000000009 | 87 | 275 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
