| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g006500.1 |
| Family | GH47 |
| Protein Properties | Length: 643 Molecular Weight: 71699.6 Isoelectric Point: 7.3398 |
| Chromosome | Chromosome/Scaffold: 9 Start: 10405779 End: 10409480 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 141 | 631 | 0 |
| AFEHAWSGYQKYAMGYDELMPLSHRGTDGLGGLGATIVDSLDTAIIMGADDVVSEASKWIEDNLMQRISEKGQVNLFETTIRVLGGLLSAYHLSGGHHPG AGDSGVPVTYKKANPERLLEVSKDLADRLLLAFTSSPTAIPLSDVILRDHTAHAAPDGLSSTSEASTLQLEFSYLSKVSGDPKYDREAMKVLEHMHTLPK VEGLVPIYINPSSGQFSGENIRLGSRGDSYYEYLLKVWVQQEEYRDSSLKYLFEMYTEAMRGVKHLLVRKTVPNGLVFVGELPSGQNGGFSPKMDHLVCF LPGTLALGATKGITKRKALESNLLTDEDKENLQLAEDLAKTCVEMYFVTSTGLAPEIAYFHIEGDTEGGPDGGNKSSKYINDIIIKPLDRHNLLRPETVE SLFVLYRITEDPKYREWGWQIFQAFEKYTKVDSGGYTSLDDVTSLPPSTRDKMETFFLGETLKYLYLLFDENNTLPLDKYVFNTEAHPLPV | |||
| Full Sequence |
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| Protein Sequence Length: 643 Download |
| MSGTSGPLPY SMRDVGAGGA YNNAKFRHRS RLKIVLQSLA TNSSKYRCGK FTVGKFLSLL 60 MVSGLLYLFL HKGSEGIVSS ELHGKEVQNK NVRRAPNIRR FWRKPPRLPP RLPPNEIYKN 120 NSLLQQSPSE WTSRQKKVKE AFEHAWSGYQ KYAMGYDELM PLSHRGTDGL GGLGATIVDS 180 LDTAIIMGAD DVVSEASKWI EDNLMQRISE KGQVNLFETT IRVLGGLLSA YHLSGGHHPG 240 AGDSGVPVTY KKANPERLLE VSKDLADRLL LAFTSSPTAI PLSDVILRDH TAHAAPDGLS 300 STSEASTLQL EFSYLSKVSG DPKYDREAMK VLEHMHTLPK VEGLVPIYIN PSSGQFSGEN 360 IRLGSRGDSY YEYLLKVWVQ QEEYRDSSLK YLFEMYTEAM RGVKHLLVRK TVPNGLVFVG 420 ELPSGQNGGF SPKMDHLVCF LPGTLALGAT KGITKRKALE SNLLTDEDKE NLQLAEDLAK 480 TCVEMYFVTS TGLAPEIAYF HIEGDTEGGP DGGNKSSKYI NDIIIKPLDR HNLLRPETVE 540 SLFVLYRITE DPKYREWGWQ IFQAFEKYTK VDSGGYTSLD DVTSLPPSTR DKMETFFLGE 600 TLKYLYLLFD ENNTLPLDKY VFNTEAHPLP VMRSAERASH SV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 2.0e-174 | 133 | 631 | 506 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 0 | 141 | 631 | 494 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT01383.1 | 0 | 27 | 642 | 86 | 701 | putative alpha-mannosidase [Oryza sativa Japonica Group] |
| GenBank | EAY96947.1 | 0 | 27 | 642 | 86 | 701 | hypothetical protein OsI_18866 [Oryza sativa Indica Group] |
| RefSeq | NP_001054909.1 | 0 | 7 | 642 | 10 | 645 | Os05g0209100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001148788.1 | 0 | 1 | 642 | 1 | 642 | LOC100282405 [Zea mays] |
| RefSeq | XP_002440782.1 | 0 | 1 | 642 | 1 | 642 | hypothetical protein SORBIDRAFT_09g006500 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fo3_A | 0 | 126 | 635 | 2 | 460 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1fo2_A | 0 | 126 | 635 | 2 | 460 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 126 | 631 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 106 | 635 | 68 | 538 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1dl2_A | 0 | 135 | 642 | 6 | 505 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO845862 | 338 | 275 | 612 | 0 |
| GO864530 | 322 | 189 | 510 | 0 |
| GO864806 | 299 | 249 | 547 | 0 |
| BG837941 | 273 | 371 | 643 | 0 |
| GT041523 | 282 | 362 | 643 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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