| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g006670.1 |
| Family | CBM49 |
| Protein Properties | Length: 628 Molecular Weight: 68747.2 Isoelectric Point: 8.5238 |
| Chromosome | Chromosome/Scaffold: 9 Start: 10779285 End: 10781813 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM49 | 535 | 612 | 3.3e-36 |
| IEIEQNVTRTWARRRTTYYRYSVTVTNRSRKTVRELHLGVSELRGRLWGLDRARYGYVPPKWLPALRAGKSLRFVYVQ | |||
| GH9 | 28 | 493 | 0 |
| DYASALKKTILYFEAQRSGVLPPNQRVTWRGNSGLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWGILEYGRQMAAAGELRNAMDAVKWGTDYF IKAHPEPEVLYGEVGDGDTDHSCWQRPEDMSTSRQSFRIDPQNPGSDLAGETAAAMAAASLVFRNTYPGYANLLLEHAKQLFQFADKYRGKYDASIPVAR NYYGSFSGYGDELLWAAAWLYEATEEGCYLEYLARNGDALGGTGWSINQFGWDVKYPGVQVLAAKFLLQGRAGAHAAALQRYRQNAEFFVCSCVGKGAVN VPRTPGGVMYHQRWNNLQFVTSASFLLTVYADYATALPGSSGGAVRCPAGAARPFEILAFVRSQVNYILGDNPRGTSYMVGYGGSFPRQVHHRGASIVSV RTDPSFVSCQEGYSAWYPRQAGNPNVLEGAIVGGPDEYDDFADERNNYEQTEAATYNSAPLLGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 628 Download |
| MAMNVIALLG LLAVASVVRT ASGAGGHDYA SALKKTILYF EAQRSGVLPP NQRVTWRGNS 60 GLFDGKANGV DLVGGYYDAG DNVKFGLPMA FTVTMMSWGI LEYGRQMAAA GELRNAMDAV 120 KWGTDYFIKA HPEPEVLYGE VGDGDTDHSC WQRPEDMSTS RQSFRIDPQN PGSDLAGETA 180 AAMAAASLVF RNTYPGYANL LLEHAKQLFQ FADKYRGKYD ASIPVARNYY GSFSGYGDEL 240 LWAAAWLYEA TEEGCYLEYL ARNGDALGGT GWSINQFGWD VKYPGVQVLA AKFLLQGRAG 300 AHAAALQRYR QNAEFFVCSC VGKGAVNVPR TPGGVMYHQR WNNLQFVTSA SFLLTVYADY 360 ATALPGSSGG AVRCPAGAAR PFEILAFVRS QVNYILGDNP RGTSYMVGYG GSFPRQVHHR 420 GASIVSVRTD PSFVSCQEGY SAWYPRQAGN PNVLEGAIVG GPDEYDDFAD ERNNYEQTEA 480 ATYNSAPLLG VLARLAGACG TGLEEYQLPP PEAAANETSS PSHRRRHHAP SSSPIEIEQN 540 VTRTWARRRT TYYRYSVTVT NRSRKTVREL HLGVSELRGR LWGLDRARYG YVPPKWLPAL 600 RAGKSLRFVY VQHGTPANVW VTGYKLL* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 0 | 19 | 627 | 614 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 21 | 625 | 608 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 20 | 509 | 492 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 21 | 496 | 476 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 28 | 493 | 468 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN25631.1 | 0 | 1 | 627 | 1 | 623 | unknown [Zea mays] |
| GenBank | ACN27322.1 | 0 | 67 | 627 | 5 | 561 | unknown [Zea mays] |
| GenBank | EAY96964.1 | 0 | 1 | 627 | 1 | 626 | hypothetical protein OsI_18884 [Oryza sativa Indica Group] |
| RefSeq | NP_001054920.1 | 0 | 8 | 627 | 13 | 629 | Os05g0212300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440792.1 | 0 | 1 | 627 | 1 | 627 | hypothetical protein SORBIDRAFT_09g006670 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 27 | 495 | 3 | 428 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
| PDB | 1ksc_A | 0 | 27 | 495 | 3 | 428 | A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution |
| PDB | 1ks8_A | 0 | 27 | 495 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 28 | 512 | 5 | 456 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 28 | 512 | 5 | 456 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
