| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g008170.1 |
| Family | GH5 |
| Protein Properties | Length: 540 Molecular Weight: 59600.2 Isoelectric Point: 7.2011 |
| Chromosome | Chromosome/Scaffold: 9 Start: 15427895 End: 15433304 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 248 | 524 | 8.80015e-43 |
| PLLRDHWSTYIVEDDFKFFASSGLTAVRIPVGWWIASDPNPPAPYVGGSLQALDNAFKWAEKYKLGVIIDLHAAPGSQNPWEHSSSRDGTQEWGTTDANI AQTVQVIDFLASRYATSSSLFAVELMNEPLAPGATLDSLTKYYRDGYDAVRKHSPTAYVVMSNRLSSGNSTELLQFASGLQGAVIDVHYYTVFNRMFNNF TVQQNIDFIRTNFSGELTTVTTHNGPLTFVGEWVAEWKVPNATKEEYQKYATAQMNVYGQATFGWSYWTAKNANNHW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MGFRGGFRPL VTLVLLCLCA SRLCSLSHAK RTPRPTPTPA KKPPPSSPSQ QSPPPPASYP 60 PLPVRAVCLG GWLVTEGWIL PSLFDGIPNK DLLDGTQVQF KSALRKTYLT ADQGGGGAVV 120 ANRTQASDWE TFKLWRMNET TFNFRTSGNQ FVGIGASDGL IVATATTPTL PETFQIVRCP 180 FDKNRVRIKA ANGYFVQAIA TGEVIADYGE PTRWSDFDAS VFLMTKVGEQ LQGEYQLCNG 240 YGTDKATPLL RDHWSTYIVE DDFKFFASSG LTAVRIPVGW WIASDPNPPA PYVGGSLQAL 300 DNAFKWAEKY KLGVIIDLHA APGSQNPWEH SSSRDGTQEW GTTDANIAQT VQVIDFLASR 360 YATSSSLFAV ELMNEPLAPG ATLDSLTKYY RDGYDAVRKH SPTAYVVMSN RLSSGNSTEL 420 LQFASGLQGA VIDVHYYTVF NRMFNNFTVQ QNIDFIRTNF SGELTTVTTH NGPLTFVGEW 480 VAEWKVPNAT KEEYQKYATA QMNVYGQATF GWSYWTAKNA NNHWDLEWMI KNGYISLKG* 540 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 8.0e-8 | 96 | 218 | 123 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 1.0e-16 | 238 | 521 | 291 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 1.0e-29 | 215 | 534 | 356 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY97220.1 | 0 | 62 | 538 | 43 | 517 | hypothetical protein OsI_19139 [Oryza sativa Indica Group] |
| GenBank | EEE62967.1 | 0 | 19 | 538 | 16 | 545 | hypothetical protein OsJ_17774 [Oryza sativa Japonica Group] |
| RefSeq | NP_001055011.1 | 0 | 19 | 538 | 16 | 524 | Os05g0244500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001150774.1 | 0 | 1 | 539 | 1 | 539 | cellulase containing protein [Zea mays] |
| RefSeq | XP_002440848.1 | 0 | 1 | 539 | 1 | 539 | hypothetical protein SORBIDRAFT_09g008170 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 2e-33 | 234 | 533 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 4e-33 | 234 | 533 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 4e-33 | 234 | 533 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
