| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g018730.2 |
| Family | GH17 |
| Protein Properties | Length: 336 Molecular Weight: 35091.8 Isoelectric Point: 6.9382 |
| Chromosome | Chromosome/Scaffold: 9 Start: 46940544 End: 46945443 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 30 | 335 | 0 |
| IGVCYGMSANNLPPASTVVSMYKSNGITAMRLYAPDQGALQAVGGSGISVTVGAPNDVLSSIAGSPAAAASWVRNNIQAYPSVSFRYVCVGNEVAGGAAQ NLAPAMENVHAALAAAGLGHIKVTTSVSQAILGVYSPPSAAQFTAEAQGFMGPVLQFLSRTGSPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGA YGYQNLFDTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLVNHVRRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQR VYPISF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 336 Download |
| MASRQGVASM FAMALLLGVF ASIPQSVEAI GVCYGMSANN LPPASTVVSM YKSNGITAMR 60 LYAPDQGALQ AVGGSGISVT VGAPNDVLSS IAGSPAAAAS WVRNNIQAYP SVSFRYVCVG 120 NEVAGGAAQN LAPAMENVHA ALAAAGLGHI KVTTSVSQAI LGVYSPPSAA QFTAEAQGFM 180 GPVLQFLSRT GSPLMANIYP YLAWAYNPSA MDMSYALFTA SGTVVQDGAY GYQNLFDTTV 240 DAFYVAMGRN GGSGVPLVVS ESGWPSGGGV QATPANARVY NQYLVNHVRR GTPRHPGAIE 300 TYLFSMFNEN QKESGVEQNW GLFYPNMQRV YPISF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 7.0e-8 | 59 | 326 | 290 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-130 | 30 | 335 | 311 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PRF/SEQDB | 0 | 1 | 335 | 1 | 334 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
| PRF/SEQDB | 0 | 24 | 335 | 1 | 312 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
| GenBank | ACG36462.1 | 0 | 1 | 335 | 1 | 336 | lichenase-2 precursor [Zea mays] |
| EMBL | CAA80493.1 | 0 | 1 | 335 | 1 | 334 | (1,3;1,4) beta glucanase [Triticum aestivum] |
| RefSeq | NP_001148461.1 | 0 | 1 | 335 | 1 | 336 | lichenase-2 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 30 | 335 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 30 | 335 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 30 | 335 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 0 | 30 | 335 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 30 | 335 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
