| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g018730.4 |
| Family | GH17 |
| Protein Properties | Length: 301 Molecular Weight: 31533.5 Isoelectric Point: 6.9514 |
| Chromosome | Chromosome/Scaffold: 9 Start: 46940544 End: 46945443 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 2 | 300 | 0 |
| SANNLPPASTVVSMYKSNGITAMRLYAPDQGALQAVGGSGISVTVGAPNDVLSSIAGSPAAAASWVRNNIQAYPSVSFRYVCVGNEVAGGAAQNLAPAME NVHAALAAAGLGHIKVTTSVSQAILGVYSPPSAAQFTAEAQGFMGPVLQFLSRTGSPLMANIYPYLAWAYNPSAMDMSYALFTASGTVVQDGAYGYQNLF DTTVDAFYVAMGRNGGSGVPLVVSESGWPSGGGVQATPANARVYNQYLVNHVRRGTPRHPGAIETYLFSMFNENQKESGVEQNWGLFYPNMQRVYPISF | |||
| Full Sequence |
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| Protein Sequence Length: 301 Download |
| MSANNLPPAS TVVSMYKSNG ITAMRLYAPD QGALQAVGGS GISVTVGAPN DVLSSIAGSP 60 AAAASWVRNN IQAYPSVSFR YVCVGNEVAG GAAQNLAPAM ENVHAALAAA GLGHIKVTTS 120 VSQAILGVYS PPSAAQFTAE AQGFMGPVLQ FLSRTGSPLM ANIYPYLAWA YNPSAMDMSY 180 ALFTASGTVV QDGAYGYQNL FDTTVDAFYV AMGRNGGSGV PLVVSESGWP SGGGVQATPA 240 NARVYNQYLV NHVRRGTPRH PGAIETYLFS MFNENQKESG VEQNWGLFYP NMQRVYPISF 300 * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 8.0e-8 | 24 | 291 | 290 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-123 | 1 | 300 | 305 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PRF/SEQDB | 0 | 1 | 300 | 35 | 334 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
| PDB | 1AQ0 | 0 | 1 | 300 | 7 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| GenBank | ACG36462.1 | 0 | 1 | 300 | 37 | 336 | lichenase-2 precursor [Zea mays] |
| RefSeq | NP_001148461.1 | 0 | 1 | 300 | 37 | 336 | lichenase-2 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 1 | 300 | 7 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 1 | 300 | 7 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 1 | 300 | 7 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 0 | 1 | 300 | 7 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 1 | 300 | 8 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE172973 | 236 | 66 | 301 | 0 |
| EE013093 | 236 | 66 | 301 | 0 |
| EC894804 | 236 | 66 | 301 | 0 |
| FL900126 | 236 | 66 | 301 | 0 |
| FL902757 | 236 | 66 | 301 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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