| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g018750.1 |
| Family | GH17 |
| Protein Properties | Length: 338 Molecular Weight: 35071.7 Isoelectric Point: 4.5926 |
| Chromosome | Chromosome/Scaffold: 9 Start: 47019339 End: 47022610 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 31 | 336 | 0 |
| IGVSYGMSGDNLPPASSVIGMYKDNGISLMRIYAPDQAALRAVGGTGIRVVVGAPNDVLSSLAASPAAAASWVRNNIQAYPKVSFRCVCVGNEVAGGAAQ NLVPAMENVRAALAAAGLDGIKVTTSVSQAILGGYKPPSAAEFTDEAQGFMGPVLDFLARTGAPLMASVYPYFTYATNPSAMDVSYALFTAPGTVLKDGD YEYQNLFDATVDSFYVAMGNHGGSGVTLVVSESGWPSAGGVAASPENAAIYNQNLINHVGRGTPRHPGAIETILFSMFNENLKENGVEQNWGLFYPNMQR VYPISF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 338 Download |
| MASQSAASML ATAALLLGVF ANIAPTVVES IGVSYGMSGD NLPPASSVIG MYKDNGISLM 60 RIYAPDQAAL RAVGGTGIRV VVGAPNDVLS SLAASPAAAA SWVRNNIQAY PKVSFRCVCV 120 GNEVAGGAAQ NLVPAMENVR AALAAAGLDG IKVTTSVSQA ILGGYKPPSA AEFTDEAQGF 180 MGPVLDFLAR TGAPLMASVY PYFTYATNPS AMDVSYALFT APGTVLKDGD YEYQNLFDAT 240 VDSFYVAMGN HGGSGVTLVV SESGWPSAGG VAASPENAAI YNQNLINHVG RGTPRHPGAI 300 ETILFSMFNE NLKENGVEQN WGLFYPNMQR VYPISFN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-11 | 58 | 327 | 284 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-131 | 31 | 336 | 311 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PRF/SEQDB | 0 | 1 | 336 | 1 | 334 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
| GenBank | ACG36462.1 | 0 | 1 | 336 | 1 | 336 | lichenase-2 precursor [Zea mays] |
| RefSeq | NP_001148461.1 | 0 | 1 | 336 | 1 | 336 | lichenase-2 [Zea mays] |
| RefSeq | NP_001150348.1 | 0 | 1 | 337 | 1 | 336 | lichenase-2 [Zea mays] |
| RefSeq | XP_002441003.1 | 0 | 1 | 337 | 1 | 337 | hypothetical protein SORBIDRAFT_09g018750 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 31 | 336 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 31 | 336 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 31 | 336 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 0 | 31 | 336 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 30 | 336 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
