| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g021140.1 |
| Family | GH35 |
| Protein Properties | Length: 785 Molecular Weight: 87566.3 Isoelectric Point: 6.5093 |
| Chromosome | Chromosome/Scaffold: 9 Start: 50556375 End: 50561841 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 49 | 340 | 0 |
| LVVDGTRRLLFAGEMHYTRSTPEMWPKLIAKAKEGGLDMIQTYVFWNVHEPVQGQYNFEGRYDLVRFIKEIQAQGLYVSLRIGPFIESEWKYGGFPFWLH DVPNITFRSDNEPFKQHMQRFVTDIVNMMKHEGLYYPQGGPIITSQIENEYQMVEHAFGSSGQRYVSWAAAMAVDRQTGVPWTMCKQNDAPDPVVGIHSH TIPLDFPNASRNYLIYGNDTKLRSPEDIAFAVVYFIARKNGSYVSYYMYHGGTNFGRFASSYVTTSYYDAAPLDEYGLIWQPTWGHLRELHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 785 Download |
| MPINIAATAL LAVLAALLCM PPATVVAAIR WVEEEDGAPR QVSLDARALV VDGTRRLLFA 60 GEMHYTRSTP EMWPKLIAKA KEGGLDMIQT YVFWNVHEPV QGQYNFEGRY DLVRFIKEIQ 120 AQGLYVSLRI GPFIESEWKY GGFPFWLHDV PNITFRSDNE PFKQHMQRFV TDIVNMMKHE 180 GLYYPQGGPI ITSQIENEYQ MVEHAFGSSG QRYVSWAAAM AVDRQTGVPW TMCKQNDAPD 240 PVVGIHSHTI PLDFPNASRN YLIYGNDTKL RSPEDIAFAV VYFIARKNGS YVSYYMYHGG 300 TNFGRFASSY VTTSYYDAAP LDEYGLIWQP TWGHLRELHA AVKQSSEPLL FGTYSYLSLG 360 QEQEAHIFET ESQCVAFLVN FDRHHISEVV FRNISLELAP KSISILSDCK RVVFETAKVT 420 AQHGSRTAEE VQSFSDINTW TAFKEPIPQD VSKAMYSGNR LFEHLSTTKD DTDYLWYIVG 480 LFHNILGRIH GSHGGPANII LNTNISLKEG PNTISLLSAM VGSPDSGAHM ERRVFGLQKV 540 SIQQGQEPEN LLNNELWGYQ VGLFGERNSI YTQEGSKSVE WTTIYNLAYS PLTWYKTTFS 600 TPAGNDAVTL NLTGMGKGEV WVNGESIGRY WVSFKAPSGN PSQSLYHIPR QFLNPQDNIL 660 VLFEEMGGNP QQITVNTVSV TRVCVNVNEL SAPSLQYKNK EPAVDLRCQE GKQISAIEFA 720 SYGNPIGDCK KIRFGSCHAG SSESVVKQAC LGKSGCSIPI TPIKFGGDPC PGIKKSLLVV 780 ANCR* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 5.0e-5 | 70 | 147 | 84 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 2.0e-19 | 706 | 783 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 2.0e-20 | 42 | 310 | 322 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-118 | 48 | 342 | 325 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 42 | 783 | 819 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC64531.1 | 0 | 30 | 784 | 21 | 811 | beta-galactosidase 6 [Oryza sativa Indica Group] |
| GenBank | EEC79266.1 | 0 | 30 | 784 | 17 | 761 | hypothetical protein OsI_20049 [Oryza sativa Indica Group] |
| GenBank | EEE63798.1 | 0 | 30 | 784 | 21 | 765 | hypothetical protein OsJ_18622 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q75HQ3 | 0 | 30 | 784 | 21 | 775 | BGAL7_ORYSJ RecName: Full=Beta-galactosidase 7; Short=Lactase 7; Flags: Precursor |
| RefSeq | XP_002441139.1 | 0 | 1 | 784 | 1 | 784 | hypothetical protein SORBIDRAFT_09g021140 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 8e-29 | 48 | 338 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.001 | 507 | 667 | 435 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 7e-26 | 41 | 325 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 7e-26 | 41 | 325 | 10 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
