| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g022050.1 |
| Family | GH3 |
| Protein Properties | Length: 620 Molecular Weight: 67289.5 Isoelectric Point: 5.1261 |
| Chromosome | Chromosome/Scaffold: 9 Start: 51691281 End: 51694356 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 90 | 328 | 0 |
| LSSRLGVPILYGTDAVHGHNNVYGATVFPHNVGLGASRDGELARRIGEATALEVRATGIHWTFAPCVAVCRDPRWGRCYESYSEDTEIVRSLTTIVSGLQ GQPPADHPHGYPFLASPRENVLACAKHFVGDGGTDKGVNEGNAICSYEDLEAIHMTPYPDCIAQGVATVMASYSKWNGESLHSSRYLLTDVLKGKLGFKG LLISDWEGIDRICEPQKPRGSDYRYCIAQSVNAGMDMIM | |||
| Full Sequence |
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| Protein Sequence Length: 620 Download |
| MAPEARGEAA PVYRDASAPV EARVRDLLGR MTLREKAAQM AQIERTVPTP RALTDLGAGS 60 VLNAGGSTPR ERASPADWAA MVDGMQRLAL SSRLGVPILY GTDAVHGHNN VYGATVFPHN 120 VGLGASRDGE LARRIGEATA LEVRATGIHW TFAPCVAVCR DPRWGRCYES YSEDTEIVRS 180 LTTIVSGLQG QPPADHPHGY PFLASPRENV LACAKHFVGD GGTDKGVNEG NAICSYEDLE 240 AIHMTPYPDC IAQGVATVMA SYSKWNGESL HSSRYLLTDV LKGKLGFKGL LISDWEGIDR 300 ICEPQKPRGS DYRYCIAQSV NAGMDMIMIP HRFEKFLDDI VFLVEAGEIP MSRIDDAVER 360 ILRVKFISGV FEHPFSDQSL LDIVGCKEHR LLGREAVRKS LVLLKNGKDR KVSFLPLAKD 420 AKRILVAGTH ADDIGYQCGG WTIAWHGDSG KITPGTSILE AIQESVGVQT EVVYEKCPTE 480 TIIETGGFSY AVVVVGEVPY AEWTGDRTDL SIPFNGSDLI TCVASKIPTL VIVISGRPLI 540 IESHVLEQIE ALVAAWLPGT EGMGITDCLF GDHDFVGTLP VTWYRSVDQL PINAGDANYD 600 PLFPVGYGLK MFRSDDDSA* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 1.0e-36 | 15 | 601 | 625 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-47 | 401 | 609 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-76 | 32 | 364 | 337 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 3.0e-77 | 9 | 609 | 672 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 5.0e-82 | 31 | 466 | 448 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79317.1 | 0 | 19 | 615 | 13 | 606 | hypothetical protein OsI_20160 [Oryza sativa Indica Group] |
| GenBank | EEE63918.1 | 0 | 19 | 615 | 13 | 606 | hypothetical protein OsJ_18743 [Oryza sativa Japonica Group] |
| RefSeq | NP_001145784.1 | 0 | 1 | 618 | 1 | 618 | hypothetical protein LOC100279291 [Zea mays] |
| RefSeq | NP_190284.1 | 0 | 8 | 610 | 5 | 604 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002279757.1 | 0 | 12 | 609 | 116 | 711 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 12 | 609 | 4 | 597 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| PDB | 1iex_A | 0 | 12 | 609 | 4 | 597 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| PDB | 1iew_A | 0 | 12 | 609 | 4 | 597 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| PDB | 1iev_A | 0 | 12 | 609 | 4 | 597 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| PDB | 1ieq_A | 0 | 12 | 609 | 4 | 597 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO800387 | 341 | 176 | 516 | 0 |
| GO876678 | 322 | 239 | 560 | 0 |
| GO889604 | 283 | 318 | 600 | 0 |
| DR825529 | 260 | 1 | 260 | 0 |
| GO876678 | 73 | 518 | 580 | 0.48 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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