| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g022460.1 |
| Family | AA1 |
| Protein Properties | Length: 545 Molecular Weight: 58928.1 Isoelectric Point: 8.9082 |
| Chromosome | Chromosome/Scaffold: 9 Start: 52116620 End: 52118445 |
| Description | laccase 17 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 2 | 531 | 0 |
| ATVTRLCVTKSIPTVNGRFPGPRIVVREGDRLVVQVHNNINNNVTFHWHGVRQLRSGWSDGPSFITQCPIRPGQSYAYDFRIVGQRGTLWWHAHFSWLRA TLYGPLVILPPRGVPYPFPKPHAEVPLMLGEWFNADPEAVIKQALQTGGGPNVSDAYTFNGLPGPTYNCSGGGAGDTFKLRVKPGKTYLLRLVNAALNDE LFFAVANHTLTVVQADASYVKPFTADTLVISPGQTMDVLLTAAAATAPSSTAAYAIAVAPYTNTVGTFDNTTAIAVLEYYGAPPQSAAALRNLPLPALPL YNDTGAVANFSAKFRSLASAQYPALVPRTVDRRFFFAVGLGADPCQSRVNGTCQGPNGTRFAATMNNVSFTMPKTSLLQAHYQRRYSGVLTANFPGVPPT PFNYTGTPPNNTFVTHGTRVVPLSFNTTVEVVLQDTSILGAESHPLHLHGYDFFVVGQGFGNYDAGNDTAKYNLVDPVQRNTISVPTAGWVAIRFVADNP GVWIMHCHLDVHLSWGLAMAWLVNDGPLPN | |||
| Full Sequence |
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| Protein Sequence Length: 545 Download |
| MATVTRLCVT KSIPTVNGRF PGPRIVVREG DRLVVQVHNN INNNVTFHWH GVRQLRSGWS 60 DGPSFITQCP IRPGQSYAYD FRIVGQRGTL WWHAHFSWLR ATLYGPLVIL PPRGVPYPFP 120 KPHAEVPLML GEWFNADPEA VIKQALQTGG GPNVSDAYTF NGLPGPTYNC SGGGAGDTFK 180 LRVKPGKTYL LRLVNAALND ELFFAVANHT LTVVQADASY VKPFTADTLV ISPGQTMDVL 240 LTAAAATAPS STAAYAIAVA PYTNTVGTFD NTTAIAVLEY YGAPPQSAAA LRNLPLPALP 300 LYNDTGAVAN FSAKFRSLAS AQYPALVPRT VDRRFFFAVG LGADPCQSRV NGTCQGPNGT 360 RFAATMNNVS FTMPKTSLLQ AHYQRRYSGV LTANFPGVPP TPFNYTGTPP NNTFVTHGTR 420 VVPLSFNTTV EVVLQDTSIL GAESHPLHLH GYDFFVVGQG FGNYDAGNDT AKYNLVDPVQ 480 RNTISVPTAG WVAIRFVADN PGVWIMHCHL DVHLSWGLAM AWLVNDGPLP NQKLPPPPSD 540 IPRC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-42 | 1 | 114 | 116 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 3.0e-62 | 8 | 522 | 545 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 9.0e-77 | 8 | 518 | 545 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-90 | 8 | 518 | 538 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 1 | 544 | 545 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001055744.1 | 0 | 1 | 515 | 1 | 509 | Os05g0458300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105874.1 | 0 | 1 | 544 | 44 | 582 | putative laccase [Zea mays] |
| Swiss-Prot | Q0DHL5 | 0 | 1 | 544 | 1 | 539 | LAC11_ORYSJ RecName: Full=Putative laccase-11; AltName: Full=Benzenediol:oxygen oxidoreductase 11; AltName: Full=Urishiol oxidase 11; AltName: Full=Diphenol oxidase 11 |
| RefSeq | XP_002441216.1 | 0 | 1 | 544 | 1 | 544 | hypothetical protein SORBIDRAFT_09g022460 [Sorghum bicolor] |
| RefSeq | XP_002456622.1 | 0 | 1 | 544 | 48 | 579 | hypothetical protein SORBIDRAFT_03g039570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 8 | 522 | 19 | 521 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1asq_A | 0 | 8 | 522 | 19 | 521 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1asp_B | 0 | 8 | 522 | 19 | 521 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1asp_A | 0 | 8 | 522 | 19 | 521 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1aso_B | 0 | 8 | 522 | 19 | 521 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797675 | 501 | 46 | 545 | 0 |
| CA171051 | 238 | 1 | 238 | 0 |
| JG170566 | 318 | 29 | 346 | 0 |
| FL765195 | 268 | 50 | 315 | 0 |
| CA216337 | 224 | 265 | 488 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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