| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g022510.1 |
| Family | AA1 |
| Protein Properties | Length: 586 Molecular Weight: 63239.7 Isoelectric Point: 6.3882 |
| Chromosome | Chromosome/Scaffold: 9 Start: 52167276 End: 52171247 |
| Description | laccase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 31 | 571 | 0 |
| AETRKYQFDVQMTSVTRLCGTKGIVTVNGQYPGPTLFAREGDHVEVNVVNRSPYNISIHWHGVRQLLSGWADGPSYITQCPIQPGQSYVYRYQIVGQRGT LWWHAHISWLRATVYGPIVILPPAGVPYPFPAPDEEVPVMFGEWWRNDTEAVIAQALQTGGGPNVSDAYTINGLTGPLYNCSAQDTFKLKVKPGKTYMLR LINAALNDELFFSVANHTLTVVDVDALYVKPFTVDTLIIAPGQTSNVLLATKPTYPGAIYYMEARPYTNTQGTFDNTTVAGVLEYEDPSSSSSSGENQSN SNLPVFAPTLPPINDTSFVANYTAKLRSLASAEYPAAVPQDVDRRFFFTVGLGTHPCAGGVNGTCQGPNGSRFAASINNVSFVLPTTALLQAHFAGRSNG VYATNFPAFPPTPFNYAGTPPNNTNVMNGTKVAVLPFGTSVELVLQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPTNDPAKFNLVDPVERNTVGVPAG GWVAIRFRADNPGVWFMHCHLEVHMSWGLKMAWLVLDGSLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 586 Download |
| MASSSALRSS ASVVVVVVVA VVLLAAMGAE AETRKYQFDV QMTSVTRLCG TKGIVTVNGQ 60 YPGPTLFARE GDHVEVNVVN RSPYNISIHW HGVRQLLSGW ADGPSYITQC PIQPGQSYVY 120 RYQIVGQRGT LWWHAHISWL RATVYGPIVI LPPAGVPYPF PAPDEEVPVM FGEWWRNDTE 180 AVIAQALQTG GGPNVSDAYT INGLTGPLYN CSAQDTFKLK VKPGKTYMLR LINAALNDEL 240 FFSVANHTLT VVDVDALYVK PFTVDTLIIA PGQTSNVLLA TKPTYPGAIY YMEARPYTNT 300 QGTFDNTTVA GVLEYEDPSS SSSSGENQSN SNLPVFAPTL PPINDTSFVA NYTAKLRSLA 360 SAEYPAAVPQ DVDRRFFFTV GLGTHPCAGG VNGTCQGPNG SRFAASINNV SFVLPTTALL 420 QAHFAGRSNG VYATNFPAFP PTPFNYAGTP PNNTNVMNGT KVAVLPFGTS VELVLQDTSI 480 LGAESHPLHL HGFNFFVVGQ GFGNFDPTND PAKFNLVDPV ERNTVGVPAG GWVAIRFRAD 540 NPGVWFMHCH LEVHMSWGLK MAWLVLDGSL PNQKLPPPPL DLPQC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-51 | 39 | 150 | 114 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 5.0e-66 | 29 | 559 | 562 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 9.0e-73 | 29 | 559 | 557 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-82 | 33 | 559 | 565 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 31 | 568 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC71780.1 | 0 | 1 | 585 | 1 | 577 | hypothetical protein OsI_04394 [Oryza sativa Indica Group] |
| RefSeq | NP_001044773.1 | 0 | 1 | 585 | 1 | 577 | Os01g0842500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001055747.1 | 0 | 2 | 574 | 3 | 563 | Os05g0458600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002439916.1 | 0 | 1 | 585 | 1 | 585 | hypothetical protein SORBIDRAFT_09g022510 [Sorghum bicolor] |
| RefSeq | XP_002458747.1 | 0 | 15 | 585 | 11 | 579 | hypothetical protein SORBIDRAFT_03g039530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 31 | 559 | 1 | 517 | A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant |
| PDB | 1asq_A | 0 | 31 | 559 | 1 | 517 | A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant |
| PDB | 1asp_B | 0 | 31 | 559 | 1 | 517 | A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant |
| PDB | 1asp_A | 0 | 31 | 559 | 1 | 517 | A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant |
| PDB | 1aso_B | 0 | 31 | 559 | 1 | 517 | A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant |
