| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g023770.1 |
| Family | AA1 |
| Protein Properties | Length: 560 Molecular Weight: 62219.8 Isoelectric Point: 7.7258 |
| Chromosome | Chromosome/Scaffold: 9 Start: 53408401 End: 53410571 |
| Description | SKU5 similar 13 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 48 | 510 | 0 |
| VPQKVILINGEFPGPRINCTSNNNIVINVFNQLDHPLLFTWNGMQHRKNSWMDGMPGTQCPILPNTNFMYKWQPKDQIGSFYYFPSMGMQRAVGGYGGIS VYSRLLIPVPFDQPPPENDHVVLIGDWYTKDHEVLARQLDAGKSVGRPAGVVINGKGGKDLESAPLFTFDAGKTYRLRVCNTGIKASLNFRIQGHHMTLV ELEGSHTLQDVYDSLDVHVGHCLSVLVTADQKPGDYYMVASTRFIHDAKSARAVVRYAGSSAPPPAEMPEPPAGWAWSINQARSIRWNLTSSAARPNPQG SYHYGQINITRTIRVMVSRGHIDGKLRYGFNGVSHRDPETPVKLAEYFNVTDGVFSYNQMGDVPPAVNGPLHVVPNVITAEFRTFIEIVFENPEKSLDSI HLDGYAFFGVGMGPGQWSPEARVTYNLLDAVSRHTIQVYPRSWTAIMLTFDNAGMWSVRSNIW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 560 Download |
| MATTTRAAAA AGVLLLVLSA LALVARAEDP YLFFEWKVTY GTKSLLGVPQ KVILINGEFP 60 GPRINCTSNN NIVINVFNQL DHPLLFTWNG MQHRKNSWMD GMPGTQCPIL PNTNFMYKWQ 120 PKDQIGSFYY FPSMGMQRAV GGYGGISVYS RLLIPVPFDQ PPPENDHVVL IGDWYTKDHE 180 VLARQLDAGK SVGRPAGVVI NGKGGKDLES APLFTFDAGK TYRLRVCNTG IKASLNFRIQ 240 GHHMTLVELE GSHTLQDVYD SLDVHVGHCL SVLVTADQKP GDYYMVASTR FIHDAKSARA 300 VVRYAGSSAP PPAEMPEPPA GWAWSINQAR SIRWNLTSSA ARPNPQGSYH YGQINITRTI 360 RVMVSRGHID GKLRYGFNGV SHRDPETPVK LAEYFNVTDG VFSYNQMGDV PPAVNGPLHV 420 VPNVITAEFR TFIEIVFENP EKSLDSIHLD GYAFFGVGMG PGQWSPEARV TYNLLDAVSR 480 HTIQVYPRSW TAIMLTFDNA GMWSVRSNIW ERYYLGEQFY ISVISPEHSL RDEYNMPDND 540 LRCGKVVGLP LPPSYSAAR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 28 | 557 | 531 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 28 | 548 | 522 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 28 | 548 | 521 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 28 | 545 | 522 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 30 | 546 | 529 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF86554.2 | 0 | 1 | 559 | 1 | 559 | unknown [Zea mays] |
| GenBank | ACN26659.1 | 0 | 14 | 559 | 14 | 559 | unknown [Zea mays] |
| RefSeq | NP_001151772.1 | 0 | 1 | 559 | 1 | 559 | pollen-specific protein NTP303 [Zea mays] |
| RefSeq | NP_001151961.1 | 0 | 14 | 559 | 14 | 559 | pollen-specific protein NTP303 [Zea mays] |
| RefSeq | XP_002441281.1 | 0 | 1 | 559 | 1 | 559 | hypothetical protein SORBIDRAFT_09g023770 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 34 | 544 | 6 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1asq_A | 0 | 34 | 544 | 6 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1asp_B | 0 | 34 | 544 | 6 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1asp_A | 0 | 34 | 544 | 6 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1aso_B | 0 | 34 | 544 | 6 | 539 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
