y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb09g025330.1 |
Family | CBM43 |
Protein Properties | Length: 230 Molecular Weight: 21021.4 Isoelectric Point: 7.579 |
Chromosome | Chromosome/Scaffold: 9 Start: 54777748 End: 54780131 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 23 | 104 | 9.7e-26 |
CVCKTGLSDQGYQAAIDYACSKGADCASTKQGGPCYGSGNKAAVCSYICNSYYQMRSGMGATCDFNGVATLTGSDPSSGTCK |
Full Sequence |
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Protein Sequence Length: 230 Download |
MAAAPLLLLL LLAMFTASDA AFCVCKTGLS DQGYQAAIDY ACSKGADCAS TKQGGPCYGS 60 GNKAAVCSYI CNSYYQMRSG MGATCDFNGV ATLTGSDPSS GTCKFASGPS SAGTGGGAGM 120 GTGGAGAGTG GGMGAGTGAG AGTGAGTGAG TGMGTGTGTS TGAGTGTGTG AGITTPGALS 180 PPFGGTGAYG PSGAGSTDYN DAAKPRAAGL HVVAALALAT AAAAAPLLR* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-12 | 23 | 92 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-26 | 22 | 105 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG39259.1 | 0 | 3 | 229 | 2 | 230 | GPI-anchored protein [Zea mays] |
GenBank | ACN35777.1 | 0 | 3 | 229 | 2 | 237 | unknown [Zea mays] |
GenBank | ACR35121.1 | 0 | 3 | 229 | 2 | 217 | unknown [Zea mays] |
RefSeq | NP_001145893.1 | 0 | 3 | 229 | 2 | 230 | hypothetical protein LOC100279409 [Zea mays] |
RefSeq | XP_002440062.1 | 0 | 14 | 229 | 14 | 229 | hypothetical protein SORBIDRAFT_09g025330 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-16 | 21 | 108 | 12 | 99 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |