| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g025660.1 |
| Family | GT20 |
| Protein Properties | Length: 907 Molecular Weight: 101696 Isoelectric Point: 5.5005 |
| Chromosome | Chromosome/Scaffold: 9 Start: 55095398 End: 55098678 |
| Description | trehalose-phosphatase/synthase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT20 | 72 | 572 | 0 |
| AVGERLIVVANQLPVVARRRPDGGRGWVFSWDEDSLLLRLRDGVPDEMEVFFVGSLRADVPPGEQEEVSQSLIDGFRCAPVFLAPELNERFYHHFCKRYL WPLFHYMLPFASPLPPTAEAAASGDGGRFDRSAWEAYVLANKHFYEKVVEVINPEDDYVWVHDYHLMALPTFLRRRFNRLRIGFFLHSPFPSSEIYRTLP VREEVLRTLLNCDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPMGIHMGQLQSVLRLPEKEDKVAELRQRFQGKAVLLGVDDT DIFKGINLKLLAFENMLRMHPKWQGRAVLVQIANPPRGKGKEMEAIQAEIRESCDRINREFGQTGYSPVVFIDRNVSSAERLAYYTIAECVVVTAVRDGM NLTPYEYIVCRQGIPGSESAPEVSGPKKSMLVVSEFIGCSPSLSGAIRVNPWNVETTAEALNEAISMSEQEKQLRHGKHYRYVSTHDVAYWSKSFVQDLE R | |||
| Full Sequence |
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| Protein Sequence Length: 907 Download |
| MMSRSYTNLL DLAAGNFAAL GPSGGGRRRL GSFGAKRMPR VMTVPGTLSD LDDDDDEQAA 60 TSSVASDVPS SAVGERLIVV ANQLPVVARR RPDGGRGWVF SWDEDSLLLR LRDGVPDEME 120 VFFVGSLRAD VPPGEQEEVS QSLIDGFRCA PVFLAPELNE RFYHHFCKRY LWPLFHYMLP 180 FASPLPPTAE AAASGDGGRF DRSAWEAYVL ANKHFYEKVV EVINPEDDYV WVHDYHLMAL 240 PTFLRRRFNR LRIGFFLHSP FPSSEIYRTL PVREEVLRTL LNCDLIGFHT FDYARHFLSC 300 CSRMLGLEYQ SKRGYIGLEY FGRTVGIKIM PMGIHMGQLQ SVLRLPEKED KVAELRQRFQ 360 GKAVLLGVDD TDIFKGINLK LLAFENMLRM HPKWQGRAVL VQIANPPRGK GKEMEAIQAE 420 IRESCDRINR EFGQTGYSPV VFIDRNVSSA ERLAYYTIAE CVVVTAVRDG MNLTPYEYIV 480 CRQGIPGSES APEVSGPKKS MLVVSEFIGC SPSLSGAIRV NPWNVETTAE ALNEAISMSE 540 QEKQLRHGKH YRYVSTHDVA YWSKSFVQDL ERACKDHFRK PCWGIGLGFG FRVVALDPHF 600 TKLNLDTIIM SYERAKSRVI LLDYDGTLVP QTSIDKKPSS EILRIINTLC LDNNNTVFIV 660 SGRSRDSLGS LFALCPKLGI AAEHGYFLRW TRDEGWQSSS HTSDFGWMQM AEPVMNLYTE 720 STDGSYIETK ETALVWHHQD ADPGFGSSQA KEMLDHLESV LANEPVAVKS GQFIVEVKPQ 780 GVSKGLVAEK ILTLMKEKGR QADFVLCIGD DRSDEDMFEN IADVMKRNNV APKTPLFACT 840 VGQKPSKARF YLDDTFEVVN MLSLLADASE PDPVIELEED DLATSVSAID ISDEPPQLGN 900 RRDEGS* 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03063 | PLN03063 | 1.0e-169 | 76 | 869 | 835 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
| PLN02205 | PLN02205 | 0 | 1 | 870 | 879 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
| pfam00982 | Glyco_transf_20 | 0 | 75 | 572 | 502 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
| PRK14501 | PRK14501 | 0 | 76 | 868 | 799 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
| cd03788 | GT1_TPS | 0 | 76 | 571 | 496 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005992 | trehalose biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79533.1 | 0 | 1 | 906 | 1 | 899 | hypothetical protein OsI_20637 [Oryza sativa Indica Group] |
| GenBank | EEE64369.1 | 0 | 1 | 906 | 1 | 899 | hypothetical protein OsJ_19211 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056050.1 | 0 | 1 | 906 | 1 | 899 | Os05g0517200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002440081.1 | 0 | 1 | 906 | 1 | 906 | hypothetical protein SORBIDRAFT_09g025660 [Sorghum bicolor] |
| RefSeq | XP_002458490.1 | 0 | 1 | 906 | 1 | 910 | hypothetical protein SORBIDRAFT_03g034640 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uqu_B | 0 | 160 | 572 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1uqu_A | 0 | 160 | 572 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1uqt_B | 0 | 160 | 572 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1uqt_A | 0 | 160 | 572 | 74 | 453 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1gz5_D | 0 | 160 | 572 | 73 | 452 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777775 | 783 | 98 | 870 | 0 |
| HO779327 | 524 | 118 | 639 | 0 |
| HO779327 | 239 | 635 | 873 | 0 |
| HO795511 | 475 | 402 | 876 | 0 |
| HO777775 | 93 | 1 | 93 | 0.44 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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