| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g025890.1 |
| Family | GH17 |
| Protein Properties | Length: 337 Molecular Weight: 35447.4 Isoelectric Point: 6.6267 |
| Chromosome | Chromosome/Scaffold: 9 Start: 55281020 End: 55282030 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 24 | 334 | 0 |
| GVCYGVVGDNLPSRADVVQLYKSSNIHAMRIYYPDPEALAALRGSGIGLILDVGGVDDVRGLASSASAAAAWVHANVVAHYPDVLIRYIAVGNEVPAGDA GLILLPAMRNVRAAVASAGLAGAIKVSTAVRMDVVTDSFPPSRGVFSPSVQRHMVPVARFLADAGSPLLANVYPYFAYRDNPRDITLGYATFQPGTAVTD DGSGLTYTNIFAAMVDAIHAALEKAGAPGVRIVVSESGWPSAGGFAATVENARRYNQGLIDHAYRGTPKRPGALETYVFAMFNENQKPGDPTERNFGLFY PNKEPVYSISF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 337 Download |
| MLFAAILILC SFDPPACAAA GVHGVCYGVV GDNLPSRADV VQLYKSSNIH AMRIYYPDPE 60 ALAALRGSGI GLILDVGGVD DVRGLASSAS AAAAWVHANV VAHYPDVLIR YIAVGNEVPA 120 GDAGLILLPA MRNVRAAVAS AGLAGAIKVS TAVRMDVVTD SFPPSRGVFS PSVQRHMVPV 180 ARFLADAGSP LLANVYPYFA YRDNPRDITL GYATFQPGTA VTDDGSGLTY TNIFAAMVDA 240 IHAALEKAGA PGVRIVVSES GWPSAGGFAA TVENARRYNQ GLIDHAYRGT PKRPGALETY 300 VFAMFNENQK PGDPTERNFG LFYPNKEPVY SISFPN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-148 | 23 | 334 | 313 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY77193.1 | 0 | 21 | 335 | 3 | 316 | hypothetical protein OsI_05162 [Oryza sativa Indica Group] |
| GenBank | EAY77194.1 | 0 | 21 | 335 | 3 | 316 | hypothetical protein OsI_05163 [Oryza sativa Indica Group] |
| RefSeq | NP_001045385.1 | 0 | 21 | 335 | 3 | 316 | Os01g0946600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001045386.1 | 0 | 21 | 335 | 3 | 316 | Os01g0946700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441397.1 | 0 | 1 | 336 | 1 | 336 | hypothetical protein SORBIDRAFT_09g025890 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 24 | 334 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 24 | 334 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 24 | 334 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 24 | 334 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 24 | 334 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
