| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g026870.1 |
| Family | GH35 |
| Protein Properties | Length: 609 Molecular Weight: 68485.2 Isoelectric Point: 5.902 |
| Chromosome | Chromosome/Scaffold: 9 Start: 56048695 End: 56055225 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 41 | 262 | 0 |
| KDGAPFQIVGGDVHYFRIVPEYWKDRLLRAKALGLNTIQTYVPWNLHEPEQQSWKFEGFADIESYLRLAQELEMLVMLRIGPYICGEWDLGGFPPWLLTI EPALKLRSSDSSYLSLVERWWGVLLPKVAPLLYNNGGSVIMVQIENEFGSFGDDKNYLHYLVQLARRYLGNNIILYTTDGGAMGNLKNGSIPQDDVFAAV DFETGSNPWPIFRLQKKYNLPG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 609 Download |
| MASGGTFRNL LLVLPLCLAL ASLVGGEASR RFWIENDTFR KDGAPFQIVG GDVHYFRIVP 60 EYWKDRLLRA KALGLNTIQT YVPWNLHEPE QQSWKFEGFA DIESYLRLAQ ELEMLVMLRI 120 GPYICGEWDL GGFPPWLLTI EPALKLRSSD SSYLSLVERW WGVLLPKVAP LLYNNGGSVI 180 MVQIENEFGS FGDDKNYLHY LVQLARRYLG NNIILYTTDG GAMGNLKNGS IPQDDVFAAV 240 DFETGSNPWP IFRLQKKYNL PGKSAPLSSL GLLILFLHEV VQMAHGGTNF GFYNGANTGQ 300 DESDYKPDLT SYDYATLRRV IHECTGTPLH PLPSDIEKAS YGLVKLEKVA SLFDIIDNIS 360 DPLKVSVSEH PLYMEQIGQV HDRAQVFVSC SVDGVRNLRY GGVIERWSNK TLEIPNLRCS 420 STTSLYILVE NMGRVNYGPY IFDRKGILSP IQIDGITIRH WKMYPLALNS LDRLPKLQLI 480 TQIPYVGASK MSIHGDSEKN LQESSSYSNG SISALPAFYE GHFHIDYESE IKDTFISFRG 540 WNKGVAFVNN FNIGRFWPVR GPQCALYVPA PILRSGDNIV VIFELHDPNP ELTIDFVTEP 600 DFTCGPKQ* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 4.0e-5 | 61 | 189 | 146 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 6.0e-27 | 37 | 212 | 188 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 5.0e-30 | 48 | 189 | 144 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-109 | 38 | 314 | 301 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV59405.1 | 0 | 17 | 605 | 22 | 660 | putative beta-galactosidase [Oryza sativa Japonica Group] |
| GenBank | ACR37865.1 | 0 | 1 | 608 | 1 | 672 | unknown [Zea mays] |
| RefSeq | NP_001056172.1 | 0 | 17 | 605 | 22 | 672 | Os05g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002327549.1 | 0 | 30 | 608 | 1 | 637 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002441448.1 | 0 | 1 | 608 | 1 | 608 | hypothetical protein SORBIDRAFT_09g026870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 28 | 600 | 5 | 619 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3thd_C | 0 | 28 | 600 | 5 | 619 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3thd_B | 0 | 28 | 600 | 5 | 619 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3thd_A | 0 | 28 | 600 | 5 | 619 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3thc_D | 0 | 28 | 600 | 5 | 619 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
