| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g027450.1 |
| Family | GT47 |
| Protein Properties | Length: 417 Molecular Weight: 47180.4 Isoelectric Point: 6.9404 |
| Chromosome | Chromosome/Scaffold: 9 Start: 56538961 End: 56542384 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 49 | 344 | 0 |
| RLKVYVYELPPKYNKNILAKDSRCLSHMFATEIFMHRFLLTSAVRTLNPDEADWFYTPVYTTCDLTPWGHPLTTKSPRMMRSAIQYISKRWPYWNRTEGA DHFFVTPHDFGACFYFQEETAIQRGVLPVLRRATLVQTFGQKHHVCLKEGSITIPPYAPPHKIRTHIVPPETPRSIFVYFRGLFYDTANDPEGGYYARGA RASVWENFKNNALFDISTEHPPTYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIAVFVAEDDVLKLDTILTSI | |||
| Full Sequence |
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| Protein Sequence Length: 417 Download |
| MGRGSAMAQA LALVALLLAC SDVAVVAAQE TERIQGSAGD VLEDDPVGRL KVYVYELPPK 60 YNKNILAKDS RCLSHMFATE IFMHRFLLTS AVRTLNPDEA DWFYTPVYTT CDLTPWGHPL 120 TTKSPRMMRS AIQYISKRWP YWNRTEGADH FFVTPHDFGA CFYFQEETAI QRGVLPVLRR 180 ATLVQTFGQK HHVCLKEGSI TIPPYAPPHK IRTHIVPPET PRSIFVYFRG LFYDTANDPE 240 GGYYARGARA SVWENFKNNA LFDISTEHPP TYYEDMQRAI FCLCPLGWAP WSPRLVEAVV 300 FGCIPVIIAD DIVLPFADAI PWEEIAVFVA EDDVLKLDTI LTSIPMEEIL RKQRLLANPS 360 MKQAMLFPQP AEPRDAFHQV LNGLARKLPH GKGVFLKPGQ KVLNWTEGTR EDLKPW* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 3.0e-81 | 49 | 344 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF87529.1 | 0 | 2 | 416 | 3 | 418 | unknown [Zea mays] |
| GenBank | ACG31432.1 | 0 | 2 | 416 | 4 | 419 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| GenBank | ACG36767.1 | 0 | 1 | 416 | 1 | 417 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | NP_001147714.1 | 0 | 20 | 416 | 22 | 418 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | XP_002440185.1 | 0 | 1 | 416 | 1 | 416 | hypothetical protein SORBIDRAFT_09g027450 [Sorghum bicolor] |
