| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g028570.1 |
| Family | GT4 |
| Protein Properties | Length: 1061 Molecular Weight: 118271 Isoelectric Point: 6.3813 |
| Chromosome | Chromosome/Scaffold: 9 Start: 57451167 End: 57463622 |
| Description | sucrose phosphate synthase 1F |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 489 | 657 | 2.8026e-45 |
| SNPRKPMILALARPDPKKNITTLVKAFGEHRELRNLANLTLIMGNRDVIDEMSSTNAAVLTSVLKLIDKYDLYGQVAYPKHHKQFEVPDIYRLAARTKGV FINCAFIEPFGLTLIEAAAYGLPMVATRNGGPVDIHRVLDNGILVDPHNQNEIGEALYKLVSDKQLWTR | |||
| Full Sequence |
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| Protein Sequence Length: 1061 Download |
| MAGNDWINSY LEAILDAGGA AGEISAAAGS GGGGDGTAGE KRDKSSLMLR ERGRFSPARY 60 FVEEVISGFD ETDLYKTWVR TSAMRSPQER NTRLENMSWR IWNLVRKKKQ IEGEEASRLS 120 KRRMELEKAR QYAATDLSED LSEGEKGETN NEPSIHDESM RTRMPRIGST DAIETWANQH 180 KDKKLYIVLI SIHGLIRGEN MELGRDSDTG GQVKYVVELA RALGSTPGVY RVDLLTRQIS 240 APDVDWSYGE PTEMLSPISS ENFGHELGES SGAYIVRIPF GPRDKYIPKE HLWPHIQEFV 300 DGALVHIMQM SKVLGEQIGS GQPVWPVVIH GHYADAGDSA ALLSGALNVP MVFTGHSLGR 360 DKLEQILKQG RQTRDEINAT YKIMRRIEAE ELCLDASEII ITSTRQEIEQ QWGLYDGFDL 420 TMARKLRARI KRGVSCFGRY MPRMIAIPPG MEFSHIAPHD VDQDSEEGNE DGSGSPDPPI 480 WADIMRFFSN PRKPMILALA RPDPKKNITT LVKAFGEHRE LRNLANLTLI MGNRDVIDEM 540 SSTNAAVLTS VLKLIDKYDL YGQVAYPKHH KQFEVPDIYR LAARTKGVFI NCAFIEPFGL 600 TLIEAAAYGL PMVATRNGGP VDIHRVLDNG ILVDPHNQNE IGEALYKLVS DKQLWTRCRQ 660 NGLKNIHQFS WPEHCKNYLA RVVTLKPRHP RWQKNDVATE ISEADSPEDS LRDIHDISLN 720 LKLSLDSEKS GSKEGNSNTV RRHLEDAVQK LSGVSDIKKD GPGENGKWPS LRRRKHIIVI 780 AVDSVQDADF VQVIKSIFEA SSNERSNGSV GFVLSTARAI SEIHALLISG GIEASDFDAF 840 ICNSGSDLCY PSSNSEDMLS PAELPFMIDL DYHSQIEYRW GGEGLRKTLI RWASEKNNES 900 GQKILVEDEE CSSTYCISFK VSNTAAAPPV KEIRRTMRIQ ALRCHVLYSH DGSKLNVIPV 960 LASRSQALRY LYIRWGVELS NITVVVGECG DTDYEGLLGG VHKTIILKGS FNTAPNQVHA 1020 NRSYSFQDVV SLEKQGIASI EGYGPDNLKS ALRQFGISKD * 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00142 | PLN00142 | 3.0e-30 | 187 | 685 | 559 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 4.0e-44 | 187 | 685 | 534 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03800 | GT1_Sucrose_synthase | 5.0e-138 | 186 | 680 | 496 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| TIGR02472 | sucr_P_syn_N | 2.0e-166 | 185 | 680 | 498 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| TIGR02468 | sucrsPsyn_pln | 0 | 1 | 1056 | 1072 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ56529.1 | 0 | 1 | 1060 | 1 | 1064 | putative sucrosephosphate synthase [Oryza sativa Japonica Group] |
| GenBank | ABX59534.1 | 0 | 1 | 1060 | 1 | 1060 | sucrose phosphate synthase II [Saccharum officinarum] |
| DDBJ | BAI39704.1 | 0 | 1 | 1060 | 1 | 1064 | putative sucrose-phosphate synthase [Oryza sativa Indica Group] |
| RefSeq | NP_001061495.1 | 0 | 1 | 1060 | 1 | 1064 | Os08g0301500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002441522.1 | 0 | 1 | 1060 | 1 | 1060 | hypothetical protein SORBIDRAFT_09g028570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2r68_A | 0 | 208 | 688 | 31 | 462 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 2r66_A | 0 | 208 | 688 | 31 | 462 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
| PDB | 2r60_A | 0 | 208 | 688 | 31 | 462 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_H | 2e-35 | 108 | 693 | 192 | 773 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_G | 2e-35 | 108 | 693 | 192 | 773 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| sucrose biosynthesis | SUCROSE-PHOSPHATE-SYNTHASE-RXN | EC-2.4.1.14 | sucrose-phosphate synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO780468 | 452 | 1 | 452 | 0 |
| HO796578 | 426 | 181 | 598 | 0 |
| HO796578 | 85 | 576 | 660 | 7e-37 |
| HO796578 | 27 | 669 | 695 | 7e-37 |
| HO796578 | 46 | 70 | 115 | 0.0000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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