| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g003420.1 |
| Family | CE16 |
| Protein Properties | Length: 347 Molecular Weight: 37123.9 Isoelectric Point: 7.3788 |
| Chromosome | Chromosome/Scaffold: 10 Start: 3030995 End: 3032825 |
| Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE16 | 102 | 337 | 2.1e-24 |
| NFASAASSYYDDTAAMYDAITLTQQLKYYKEYQSKLGAVAGRAKAGAILADALYVVSTGTGDFLQNYYHNASLSRRYNVHQYCDLLAGIFSGFANELYRL GARRIGVTSMPPLGCLPASIRLYGEGKDACVPRLNRDAETFNQKLNATVRALKRRHADLKVAIFDIYTPLRQLAQDPAAYGFGNARGTCCQTGTAKTRVY LCNPTTAGTCRNASSYVFFDGVHPSEAANVFMAESM | |||
| Full Sequence |
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| Protein Sequence Length: 347 Download |
| MMTMMMSGGG GGGVQAQPIV PAVISFGDST IDVGNNNYLP GAVFKADYAP YGQDFVSHEA 60 TGRFSDGKIV TDITAETLGF ESYAPPYLSP QASGKNLLIG ANFASAASSY YDDTAAMYDA 120 ITLTQQLKYY KEYQSKLGAV AGRAKAGAIL ADALYVVSTG TGDFLQNYYH NASLSRRYNV 180 HQYCDLLAGI FSGFANELYR LGARRIGVTS MPPLGCLPAS IRLYGEGKDA CVPRLNRDAE 240 TFNQKLNATV RALKRRHADL KVAIFDIYTP LRQLAQDPAA YGFGNARGTC CQTGTAKTRV 300 YLCNPTTAGT CRNASSYVFF DGVHPSEAAN VFMAESMVDA GIELVT* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00657 | Lipase_GDSL | 5.0e-11 | 148 | 335 | 194 | + GDSL-like Lipase/Acylhydrolase. | ||
| COG3240 | COG3240 | 5.0e-15 | 122 | 337 | 217 | + Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | ||
| cd01846 | fatty_acyltransferase_like | 4.0e-33 | 23 | 340 | 320 | + Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols. | ||
| PLN03156 | PLN03156 | 2.0e-89 | 20 | 338 | 319 | + GDSL esterase/lipase; Provisional | ||
| cd01837 | SGNH_plant_lipase_like | 1.0e-110 | 21 | 340 | 320 | + SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006629 | lipid metabolic process |
| GO:0016788 | hydrolase activity, acting on ester bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG42669.1 | 0 | 12 | 247 | 23 | 258 | hypothetical protein [Zea mays] |
| GenBank | EEC80013.1 | 0 | 1 | 346 | 15 | 343 | hypothetical protein OsI_21681 [Oryza sativa Indica Group] |
| GenBank | EEE65090.1 | 0 | 1 | 346 | 15 | 343 | hypothetical protein OsJ_20133 [Oryza sativa Japonica Group] |
| RefSeq | NP_001140661.1 | 0 | 2 | 346 | 17 | 359 | hypothetical protein LOC100272736 [Zea mays] |
| RefSeq | XP_002436480.1 | 0 | 1 | 346 | 1 | 346 | hypothetical protein SORBIDRAFT_10g003420 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3kvn_A | 0.00001 | 114 | 345 | 105 | 323 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3kvn_X | 0.00001 | 114 | 345 | 105 | 323 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| triacylglycerol degradation | TRIACYLGLYCEROL-LIPASE-RXN | EC-3.1.1.3 | triacylglycerol lipase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FE650393 | 251 | 62 | 312 | 0 |
| HO852368 | 333 | 15 | 347 | 0 |
| HO781389 | 326 | 19 | 344 | 0 |
| DT939517 | 234 | 15 | 248 | 0 |
| EE184392 | 220 | 15 | 234 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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