PlantCAZyme

CAZyme Information

Basic Information
Species	Sorghum bicolor
Cazyme ID	Sb10g003730.1
Family	GT90
Protein Properties	Length: 553 Molecular Weight: 62686.4 Isoelectric Point: 7.2918
Chromosome	Chromosome/Scaffold: 10 Start: 3212589 End: 3214885
Description	Arabidopsis thaliana protein of unknown function (DUF821)
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

External Links

NCBI Taxonomy

Plaza

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GT90	233	480	0
RVPDLDIMFACDDPGQVRAADFPTTPSDAPPVFRYCKDALTLDIVFPDWSFWGWPEVGIRPWPQLLEEVRQENERVRWPVRQPYAFWKGNPEGYRIRHEL MRCNASNGQEWNARLFTQNWHYAIQNGFKDSRIPKQCIYRYKVYVEGNAWSVSEKYILACDSPVLFVNTPFQDILSRGLVAGKHYWPINREHICKSIKFA VDWGNEHPAQAQLIGEQGSQFVREEMSMDYIYDYMLHLLTEYAKLLRY

Full Sequence
Protein Sequence Length: 553 Download
MRSTTVFPAT TSSSGEEGSS PLVAPAMEEI TEEGRTPGKD GAALMVARTE RWLSSSPGTT 60 VLRTSGVRSV MVGFVLLALL LGARRWTGLD APSLIGNTVS IGARQRRRHH IDSTSPLLQI 120 PFTCGNETSP HPHPPKCPGT PALPPPSTPP PLPGDDPAPS CPDYFRYIHD DLRPWRGAGI 180 TREAVERARP HAYFRLVVVG GRAYVETYRR AYQTRDVFTQ WGVLQLLRRY PGRVPDLDIM 240 FACDDPGQVR AADFPTTPSD APPVFRYCKD ALTLDIVFPD WSFWGWPEVG IRPWPQLLEE 300 VRQENERVRW PVRQPYAFWK GNPEGYRIRH ELMRCNASNG QEWNARLFTQ NWHYAIQNGF 360 KDSRIPKQCI YRYKVYVEGN AWSVSEKYIL ACDSPVLFVN TPFQDILSRG LVAGKHYWPI 420 NREHICKSIK FAVDWGNEHP AQAQLIGEQG SQFVREEMSM DYIYDYMLHL LTEYAKLLRY 480 KPTVPEKAVE ICTESMACPA QGMHRDCMMD SMERQVASFN PCTLPPPFTP EEAKEIADRE 540 AEVLRKVEKM EG* 600

Full Sequence

Protein Sequence Length: 553 Download

MRSTTVFPAT TSSSGEEGSS PLVAPAMEEI TEEGRTPGKD GAALMVARTE RWLSSSPGTT    60
VLRTSGVRSV MVGFVLLALL LGARRWTGLD APSLIGNTVS IGARQRRRHH IDSTSPLLQI    120
PFTCGNETSP HPHPPKCPGT PALPPPSTPP PLPGDDPAPS CPDYFRYIHD DLRPWRGAGI    180
TREAVERARP HAYFRLVVVG GRAYVETYRR AYQTRDVFTQ WGVLQLLRRY PGRVPDLDIM    240
FACDDPGQVR AADFPTTPSD APPVFRYCKD ALTLDIVFPD WSFWGWPEVG IRPWPQLLEE    300
VRQENERVRW PVRQPYAFWK GNPEGYRIRH ELMRCNASNG QEWNARLFTQ NWHYAIQNGF    360
KDSRIPKQCI YRYKVYVEGN AWSVSEKYIL ACDSPVLFVN TPFQDILSRG LVAGKHYWPI    420
NREHICKSIK FAVDWGNEHP AQAQLIGEQG SQFVREEMSM DYIYDYMLHL LTEYAKLLRY    480
KPTVPEKAVE ICTESMACPA QGMHRDCMMD SMERQVASFN PCTLPPPFTP EEAKEIADRE    540
AEVLRKVEKM EG*                                                       600

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam05686	Glyco_transf_90	3.0e-47	436	551	116	+ Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.
pfam05686	Glyco_transf_90	3.0e-89	163	323	161	+ Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.
smart00672	CAP10	3.0e-97	233	481	256	+ Putative lipopolysaccharide-modifying enzyme.

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
DDBJ	BAD69335.1	0	37	532	29	519	unknown protein [Oryza sativa Japonica Group]
GenBank	EEE65104.1	0	37	532	34	475	hypothetical protein OsJ_20160 [Oryza sativa Japonica Group]
RefSeq	NP_001056838.1	0	37	532	34	524	Os06g0152700 [Oryza sativa (japonica cultivar-group)]
RefSeq	XP_002437850.1	0	1	552	1	552	hypothetical protein SORBIDRAFT_10g003730 [Sorghum bicolor]
RefSeq	XP_002443683.1	0	164	550	198	588	hypothetical protein SORBIDRAFT_07g000280 [Sorghum bicolor]

Hydropathy

EST Download unfiltered results here

Hit	Length	Start	End	EValue
HO180311	236	216	451	0
HO127770	228	221	448	0
HO179717	213	339	551	0
EX132718	290	222	510	0
EH727898	267	262	528	0

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_038_00046.1	Aquca_004_00351.1	Aquca_045_00089.1
Arabidopsis lyrata	910396	485256	483721	887933	486604
	483723	475010
Arabidopsis thaliana	AT5G23850.1	AT3G48980.1	AT3G61290.1	AT3G61280.1	AT2G45830.2
	AT2G45830.1	AT2G45840.1	AT1G07220.1	AT3G61270.1	AT1G63420.1
	AT3G61280.2
Brachypodium distachyon	Bradi3g50030.1	Bradi5g16810.1	Bradi5g16797.1	Bradi2g07460.1	Bradi1g61560.1
	Bradi2g35840.1
Brassica rapa	Bra018021	Bra009709	Bra007591	Bra007592	Bra014445
	Bra007593	Bra003444	Bra007590	Bra031558	Bra015563
	Bra027639	Bra004942	Bra039310
Carica papaya	evm.model.supercontig_18.237	evm.model.supercontig_112.24	evm.model.supercontig_18.236	evm.model.supercontig_107.57
Capsella rubella	Carubv10000648m	Carubv10016976m	Carubv10019114m	Carubv10016988m	Carubv10008891m
	Carubv10020086m	Carubv10018865m	Carubv10025566m	Carubv10025651m
Chlamydomonas reinhardtii	Cre02.g117650.t1.3	Cre09.g413500.t1.3	Cre12.g531750.t1.2	Cre14.g621800.t1.3
Citrus clementina	Ciclev10007061m	Ciclev10023948m	Ciclev10019760m	Ciclev10004696m	Ciclev10019647m
	Ciclev10028388m	Ciclev10020660m	Ciclev10020252m	Ciclev10021346m	Ciclev10020817m
	Ciclev10006549m
Citrus sinensis	orange1.1g043671m	orange1.1g044043m	orange1.1g017178m	orange1.1g016930m	orange1.1g011607m
	orange1.1g009387m	orange1.1g011592m	orange1.1g046815m	orange1.1g017360m	orange1.1g022616m
	orange1.1g022102m	orange1.1g022101m	orange1.1g039857m
Cucumis sativus	Cucsa.107800.1	Cucsa.107750.1	Cucsa.135430.1	Cucsa.302970.1	Cucsa.147060.1
	Cucsa.107720.1
Eucalyptus grandis	Eucgr.A02783.1	Eucgr.D01868.1	Eucgr.D01866.1	Eucgr.E00165.1	Eucgr.E00167.1
	Eucgr.E00163.1	Eucgr.J01883.1	Eucgr.D02274.1	Eucgr.I01244.1	Eucgr.E00171.1
	Eucgr.E00168.1	Eucgr.E00166.1	Eucgr.D01868.3	Eucgr.D01868.2.50.190	Eucgr.D01868.2.50.190
	Eucgr.D01868.2.190.261	Eucgr.D01868.2.190.261
Fragaria vesca	mrna32446.1-v1.0-hybrid.718.966	mrna32446.1-v1.0-hybrid.718.966	mrna32446.1-v1.0-hybrid.207.452	mrna32446.1-v1.0-hybrid.207.452	mrna13268.1-v1.0-hybrid.664.916
	mrna13268.1-v1.0-hybrid.664.916	mrna19062.1-v1.0-hybrid	mrna07900.1-v1.0-hybrid	mrna13268.1-v1.0-hybrid.179.419	mrna13268.1-v1.0-hybrid.179.419
Glycine max	Glyma16g31231.2	Glyma16g31231.1	Glyma16g31231.4	Glyma16g31231.3	Glyma03g01480.2
	Glyma09g25490.2	Glyma01g42740.2	Glyma01g42740.1	Glyma07g07910.2	Glyma07g08000.2
	Glyma03g01490.3	Glyma03g01490.2	Glyma03g01490.1	Glyma18g07010.1	Glyma11g27050.2
	Glyma11g27050.1	Glyma03g01580.2	Glyma18g46490.1	Glyma09g39700.1	Glyma0920s00200.1
	Glyma16g30430.2	Glyma16g30561.1	Glyma16g30313.1	Glyma16g31241.1
Gossypium raimondii	Gorai.004G157700.1	Gorai.007G098000.1	Gorai.008G277100.1	Gorai.007G097900.1	Gorai.008G246000.1
	Gorai.007G097800.1	Gorai.001G116200.1	Gorai.008G118500.1.121.260	Gorai.008G118500.1.121.260	Gorai.008G118500.1.262.331
	Gorai.008G118500.1.262.331
Linum usitatissimum	Lus10039228	Lus10040665	Lus10018239	Lus10039226	Lus10024519
	Lus10027472	Lus10027473	Lus10037863.306.434	Lus10037863.306.434	Lus10008017
	Lus10037864.295.404	Lus10037864.295.404	Lus10037864.182.299	Lus10037864.182.299	Lus10037863.212.306
	Lus10037863.212.306
Malus domestica	MDP0000322698	MDP0000322697	MDP0000322107	MDP0000167387	MDP0000158437
	MDP0000289383	MDP0000239614	MDP0000147543	MDP0000304021	MDP0000246269
	MDP0000261453	MDP0000151647
Manihot esculenta	cassava4.1_032880m	cassava4.1_028860m	cassava4.1_005486m	cassava4.1_025567m	cassava4.1_027328m
	cassava4.1_006037m	cassava4.1_007061m.169.306	cassava4.1_007061m.169.306	cassava4.1_007061m.306.383	cassava4.1_007061m.306.383
Medicago truncatula	Medtr6g031170.1	Medtr7g076890.1	Medtr7g076860.1	Medtr5g010500.1	Medtr6g031200.1
	Medtr6g031190.1
Mimulus guttatus	mgv1a020993m	mgv1a004518m	mgv1a010063m
Oryza sativa	LOC_Os02g42920.1	LOC_Os04g45160.1	LOC_Os04g45140.1	LOC_Os05g05690.1	LOC_Os08g01150.1
	LOC_Os04g45160.2	LOC_Os06g05940.1
Panicum virgatum	Pavirv00027487m	Pavirv00066339m	Pavirv00043004m	Pavirv00000938m	Pavirv00017588m
	Pavirv00066593m	Pavirv00063931m	Pavirv00046116m	Pavirv00058150m	Pavirv00052814m
	Pavirv00002686m	Pavirv00035277m	Pavirv00024822m	Pavirv00027719m	Pavirv00069435m
	Pavirv00064656m	Pavirv00033981m	Pavirv00004308m	Pavirv00021245m.180.302	Pavirv00021245m.180.302
	Pavirv00063538m	Pavirv00021245m.77.169	Pavirv00021245m.77.169
Phaseolus vulgaris	Phvul.004G116000.1	Phvul.010G096100.1	Phvul.010G096500.1	Phvul.006G068300.1
Picea abies	MA_53054g0010	MA_32961g0010	MA_116478g0010	MA_55748g0010	MA_10425862g0010
	MA_689724g0010	MA_129161g0010	MA_10435424g0020	MA_23554g0010	MA_912717g0010
	MA_9597898g0010	MA_4631294g0010
Populus trichocarpa	Potri.015G144400.2	Potri.015G144400.1	Potri.003G125000.3	Potri.003G125000.2	Potri.003G125000.1
	Potri.014G081600.1	Potri.001G252000.1	Potri.002G157800.2	Potri.002G157800.1	Potri.002G157900.1
Prunus persica	ppa023179m	ppa005169m	ppa004159m	ppa014578m	ppa024728m
	ppa019065m	ppa008339m	ppa026562m
Ricinus communis	30147.m013739	30147.m013740	30174.m009004	30174.m009005	29681.m001352
	30190.m011190
Setaria italica	Si035011m	Si016818m	Si009846m	Si009843m	Si024592m
	Si012640m	Si006188m	Si025803m	Si013493m	Si039647m
	Si008749m
Selaginella moellendorffii	101483	122561	419091	53405	442089
	62850	62763	91045	64803	81791
	63143	53728
Sorghum bicolor	Sb06g023680.1	Sb04g033620.1	Sb06g023670.1	Sb09g003810.1	Sb07g000280.1
Thellungiella halophila	Thhalv10003948m	Thhalv10010269m	Thhalv10005889m	Thhalv10023375m	Thhalv10006441m
	Thhalv10001309m.50.298	Thhalv10001309m.50.298	Thhalv10001309m.501.754	Thhalv10001309m.501.754	Thhalv10007804m
Vitis vinifera	GSVIVT01028972001	GSVIVT01026877001.101.348	GSVIVT01026877001.101.348	GSVIVT01019779001	GSVIVT01026877001.483.731
	GSVIVT01026877001.483.731	GSVIVT01026872001	GSVIVT01024736001	GSVIVT01026876001	GSVIVT01026878001
	GSVIVT01026871001.50.297	GSVIVT01026871001.50.297	GSVIVT01026871001.50.297	GSVIVT01026873001	GSVIVT01028968001
	GSVIVT01026871001.476.608	GSVIVT01026871001.476.608	GSVIVT01026871001.476.608	GSVIVT01026871001.628.756	GSVIVT01026871001.628.756
	GSVIVT01026871001.628.756	GSVIVT01026874001
Volvox carteri	Vocar20006148m	Vocar20001995m

Orthologous Group

Species

Aquilegia coerulea

Aquca_038_00046.1

Aquca_004_00351.1

Aquca_045_00089.1

Arabidopsis lyrata