| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g007140.1 |
| Family | GT37 |
| Protein Properties | Length: 560 Molecular Weight: 63316.5 Isoelectric Point: 8.5637 |
| Chromosome | Chromosome/Scaffold: 10 Start: 6954336 End: 6956168 |
| Description | fucosyltransferase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT37 | 88 | 530 | 0 |
| RQEKLLGGLLVPGFDERSCLSRYQSAFYRKNLTRSPSAHLIKRLRQHEALQRRCGPGTEAYRAAAARLRSWRRNGTDVDAACRYLVLVPYRGLGNRILAV ASAFLYAVLTDRVLLLDGNTSTGEIFCEPFPGTSWLLPLNFPISNLQNLTGDVRESYRNLVRNDSAAASLASRLPYVFVDLDHSCTYHDKLFFCDDERPF LRRAPWLVMRTDGYFVPALFLNPAHQDELHRMFPRKDSVFYLLAHYLFHPTNKVWGLITRFHSSYLRDSDERLGIQVRVFDGDTPFQHILEQILACTSQE HLLPDVVTQEPPRPSTAGARSKAVLMTGLSSWYYENIRWKYWQSATATGEVVSVYQPSHEEHQLSGYTTHDMKAVAEMYLLGMTDKIVTSGWSTFGYVGH GLGGLTPWIMFRPENHTTPYPPCRRAKSMEPCMHGPPFYDCRA | |||
| Full Sequence |
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| Protein Sequence Length: 560 Download |
| MALEGVVGIG IAKRPSLQCL DAVENAARRA EPDERTVEQS TTPWMIARKK VTALAVCLVA 60 LPVLMTTVSR RDSPWTPASF WPLATFARQE KLLGGLLVPG FDERSCLSRY QSAFYRKNLT 120 RSPSAHLIKR LRQHEALQRR CGPGTEAYRA AAARLRSWRR NGTDVDAACR YLVLVPYRGL 180 GNRILAVASA FLYAVLTDRV LLLDGNTSTG EIFCEPFPGT SWLLPLNFPI SNLQNLTGDV 240 RESYRNLVRN DSAAASLASR LPYVFVDLDH SCTYHDKLFF CDDERPFLRR APWLVMRTDG 300 YFVPALFLNP AHQDELHRMF PRKDSVFYLL AHYLFHPTNK VWGLITRFHS SYLRDSDERL 360 GIQVRVFDGD TPFQHILEQI LACTSQEHLL PDVVTQEPPR PSTAGARSKA VLMTGLSSWY 420 YENIRWKYWQ SATATGEVVS VYQPSHEEHQ LSGYTTHDMK AVAEMYLLGM TDKIVTSGWS 480 TFGYVGHGLG GLTPWIMFRP ENHTTPYPPC RRAKSMEPCM HGPPFYDCRA KHGADTGKLV 540 PHVQHCEDMS WGLKLVHPE* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd11548 | NodZ_like | 0.0003 | 172 | 491 | 324 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
| pfam03254 | XG_FTase | 0 | 66 | 530 | 468 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
| GO:0016020 | membrane |
| GO:0042546 | cell wall biogenesis |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD35724.1 | 0 | 1 | 559 | 1 | 565 | putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa Japonica Group] |
| GenBank | EAZ00121.1 | 0 | 99 | 558 | 99 | 563 | hypothetical protein OsI_22125 [Oryza sativa Indica Group] |
| GenBank | EAZ00130.1 | 0 | 1 | 559 | 1 | 565 | hypothetical protein OsI_22134 [Oryza sativa Indica Group] |
| RefSeq | NP_001057124.1 | 0 | 73 | 559 | 2 | 493 | Os06g0212500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002436693.1 | 0 | 1 | 559 | 1 | 559 | hypothetical protein SORBIDRAFT_10g007140 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV541140 | 252 | 259 | 508 | 0 |
| DR788766 | 225 | 285 | 508 | 0 |
| FL813192 | 208 | 353 | 559 | 0 |
| CV288405 | 307 | 224 | 529 | 0 |
| FL813192 | 35 | 318 | 352 | 0.003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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