| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g007500.1 |
| Family | GH5 |
| Protein Properties | Length: 540 Molecular Weight: 60231.6 Isoelectric Point: 5.37 |
| Chromosome | Chromosome/Scaffold: 10 Start: 7352447 End: 7356315 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 223 | 494 | 3.79752e-43 |
| MVLEEHRRSFITANDFDFLSRHGINTVRIPVGWWITQDPYPPSPFVGGSLAALDLAFSWAQSYGLKCIIDLHAAPGSQNGMEHSASRDGSVDWPSPEYIS QTLEVIDFLATRYGGHPSLLGIELLNEPSAATVPLDVLVSYYMRGYQIVRNHSSTAYVILCQRIGNADPIELFQAGIGLSNVVVDLHYYNLFDPYFATMN SSQNIEFVYKMRAPQLQDLKAMNGPLVFIGEWVNEWDVQNASQYEYQKFGSAQLDVYANATFGWSYWTLKND | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MGGLGLSGFV LFSWVLFLCC IFSVDGLSKV RGVNLGGWLV IEGWIKPSLF DGIPNGDMLV 60 GGLILVIHCV FLDGTQVQIR SVVLNKYVSA ANGGGSNVTV DRDVASTWET FRLWRVSDNE 120 FQLRCLGGQF LTVNSEDGLI LATAKHPLST ETFFIERNAG RVHIRPLNGG YVQATNNHLL 180 ISTYQFQPGW DNNLATFELV IVANNLHGDY QLANGYGSEK AKMVLEEHRR SFITANDFDF 240 LSRHGINTVR IPVGWWITQD PYPPSPFVGG SLAALDLAFS WAQSYGLKCI IDLHAAPGSQ 300 NGMEHSASRD GSVDWPSPEY ISQTLEVIDF LATRYGGHPS LLGIELLNEP SAATVPLDVL 360 VSYYMRGYQI VRNHSSTAYV ILCQRIGNAD PIELFQAGIG LSNVVVDLHY YNLFDPYFAT 420 MNSSQNIEFV YKMRAPQLQD LKAMNGPLVF IGEWVNEWDV QNASQYEYQK FGSAQLDVYA 480 NATFGWSYWT LKNDMIHWDF EWNIQNKYLL FSGSSMLKTP SFLLLLALGW GIHLIIMPR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00130 | PTZ00130 | 0.006 | 417 | 475 | 59 | + heat shock protein 90; Provisional | ||
| cd00257 | Fascin | 5.0e-7 | 75 | 183 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-16 | 213 | 494 | 288 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 6.0e-25 | 205 | 512 | 347 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ07396.1 | 0 | 3 | 527 | 2 | 526 | hypothetical protein OsI_29647 [Oryza sativa Indica Group] |
| RefSeq | NP_001062079.1 | 0 | 3 | 539 | 2 | 532 | Os08g0484100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002262875.1 | 0 | 9 | 531 | 50 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002438060.1 | 0 | 1 | 539 | 1 | 539 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 17 | 528 | 1 | 504 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 1e-29 | 209 | 501 | 45 | 370 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqp_A | 0.007 | 30 | 90 | 9 | 67 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 2pc8_A | 2e-29 | 209 | 501 | 51 | 376 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| PDB | 2pc8_A | 0.003 | 30 | 90 | 15 | 73 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| PDB | 3n9k_A | 2e-29 | 209 | 501 | 50 | 375 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
