| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g008170.1 |
| Family | GT31 |
| Protein Properties | Length: 638 Molecular Weight: 72056.5 Isoelectric Point: 6.7916 |
| Chromosome | Chromosome/Scaffold: 10 Start: 8192614 End: 8198597 |
| Description | galactosyltransferase1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 401 | 585 | 0 |
| KRRMAVRRTWMQYDDVRSGKVTVRFFVGLHKNEVVNEELWNEARTYGDIQLMPFVDYYSLILWKTIAICIYGTNVLSAKYVMKTDDDAFVRVDEILSSLD RTNISHGLLYGRVNSDSQPHRDPYSKWYITPEEWPEESYPPWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 638 Download |
| MKKWHGGFAV VSLFIILMLR YVILDSPLAE KSLQYVFQQN RTVELHWLDV PNPPAIQNPQ 60 NSSEVISTRL LASNLSITRN LSDRELQSLL CWNHLRHLLS HAHILPDGVE AIKEAGVAWR 120 ELNTALAYDD SVVSVNASIQ QKDKGKQCPY SIRRMNATRL GDRFALKLPC GLIQGSSITI 180 IGTPGGLLGN FKIELTGAAV PGEPDPPIVL HYNVRLLGDK LTEDPVIVQN TWTIADDWGS 240 ENRCPSPDSD AKDSAKVDDL EKCSSMVGED QKEILPSKLH SNVSTMPPAR KKKAEPRKYF 300 PFRQGYLAVA ILRIGAHGIH MTVDGKHITS FAFREDLEPG FVGEVRIAGD IKLLSVIASG 360 LPTTEDFEHV TDLETLKAPP VPMNKSVDLF IGVFSTANNF KRRMAVRRTW MQYDDVRSGK 420 VTVRFFVGLH KNEVVNEELW NEARTYGDIQ LMPFVDYYSL ILWKTIAICI YGTNVLSAKY 480 VMKTDDDAFV RVDEILSSLD RTNISHGLLY GRVNSDSQPH RDPYSKWYIT PEEWPEESYP 540 PWAHGPGYIV SKDIAKEVYR KHKSGELKMF KLEDVAMGIW INEMKKDGLD VKYENDGRIL 600 VEGCEDGYVV AHYQEPRDMM CLWDKFQKTK RGTCCKE* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00337 | Gal-bind_lectin | 1.0e-8 | 204 | 356 | 153 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| smart00908 | Gal-bind_lectin | 9.0e-9 | 203 | 356 | 154 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 7.0e-9 | 207 | 356 | 150 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam01762 | Galactosyl_T | 2.0e-31 | 401 | 596 | 204 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 0 | 1 | 637 | 638 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001057213.1 | 0 | 1 | 637 | 1 | 637 | Os06g0229200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002269607.1 | 0 | 1 | 637 | 1 | 635 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316134.1 | 0 | 1 | 635 | 1 | 629 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002436753.1 | 0 | 1 | 637 | 1 | 637 | hypothetical protein SORBIDRAFT_10g008170 [Sorghum bicolor] |
| RefSeq | XP_002522444.1 | 0 | 1 | 635 | 3 | 629 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
