| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g008480.1 |
| Family | GH5 |
| Protein Properties | Length: 455 Molecular Weight: 50655.1 Isoelectric Point: 9.3578 |
| Chromosome | Chromosome/Scaffold: 10 Start: 8720553 End: 8723638 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 187 | 433 | 5.3e-34 |
| QVLMNHRNIFISKRDFNFMASSGLNAVRVPVGWWIASGDNPPPFVGGSLQFLDKAFSWGQKYNISVIVTLHDAPGSQNPYEHSATRDGYANNTAFLAIEL LNEPLAPGANLSVLMKYYQDGYNAVRRYTPASYVIMSNRLNIANQTEILQFVGSFDGAVLDVHYYNLFDKKFDNLTVEQNINFVRNNRSSDLKAITNQNG RPLTFVGEWSAAWGVQGANKTDYQRFAKVQQDVYGNATFGWAYWTLQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 455 Download |
| MNLGGWLVTE GWIKPSLFYG IPNNGTMDGT QLHFMSVTQK RYLIADKGGG AAILADRMSV 60 RLGDLQGRSK SCPTLWRINE TTFNLRVNGR QFWGVNNTGA LVATATTPGQ SETFQLVCRD 120 SDKSRVRIRA PNGFFLQVKT MASVTADYGQ NTNWSDNDPS VFVTKNVGGL QGEYQLCNGY 180 GIANATQVLM NHRNIFISKR DFNFMASSGL NAVRVPVGWW IASGDNPPPF VGGSLQFLDK 240 AFSWGQKYNI SVIVTLHDAP GSQNPYEHSA TRDGYANNTA FLAIELLNEP LAPGANLSVL 300 MKYYQDGYNA VRRYTPASYV IMSNRLNIAN QTEILQFVGS FDGAVLDVHY YNLFDKKFDN 360 LTVEQNINFV RNNRSSDLKA ITNQNGRPLT FVGEWSAAWG VQGANKTDYQ RFAKVQQDVY 420 GNATFGWAYW TLQNPFLPWN MTYMIQNGII TLKS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 2.0e-8 | 192 | 432 | 260 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 7.0e-17 | 139 | 439 | 365 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE50844.1 | 0 | 1 | 452 | 427 | 894 | hypothetical protein OsJ_31274 [Oryza sativa Japonica Group] |
| GenBank | EEE50844.1 | 0 | 1 | 453 | 907 | 1377 | hypothetical protein OsJ_31274 [Oryza sativa Japonica Group] |
| RefSeq | NP_001064458.1 | 0 | 1 | 454 | 41 | 510 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002438127.1 | 0 | 1 | 454 | 1 | 454 | hypothetical protein SORBIDRAFT_10g008480 [Sorghum bicolor] |
| RefSeq | XP_002464704.1 | 0 | 1 | 454 | 46 | 516 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 3e-30 | 173 | 450 | 45 | 378 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 3o6a_A | 4e-30 | 173 | 450 | 50 | 383 | A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A |
| PDB | 2pbo_A | 5e-30 | 173 | 450 | 51 | 384 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
| PDB | 2pb1_A | 5e-30 | 173 | 450 | 51 | 384 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
| PDB | 1eqc_A | 5e-30 | 173 | 450 | 45 | 378 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DC898905 | 375 | 101 | 452 | 0 |
| DC899299 | 318 | 158 | 452 | 0 |
| EG388670 | 280 | 127 | 381 | 0 |
| FF357647 | 282 | 125 | 381 | 0 |
| CJ722362 | 284 | 123 | 381 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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