CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb10g008480.1
FamilyGH5
Protein PropertiesLength: 455 Molecular Weight: 50655.1 Isoelectric Point: 9.3578
ChromosomeChromosome/Scaffold: 10 Start: 8720553 End: 8723638
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH51874335.3e-34
  QVLMNHRNIFISKRDFNFMASSGLNAVRVPVGWWIASGDNPPPFVGGSLQFLDKAFSWGQKYNISVIVTLHDAPGSQNPYEHSATRDGYANNTAFLAIEL
  LNEPLAPGANLSVLMKYYQDGYNAVRRYTPASYVIMSNRLNIANQTEILQFVGSFDGAVLDVHYYNLFDKKFDNLTVEQNINFVRNNRSSDLKAITNQNG
  RPLTFVGEWSAAWGVQGANKTDYQRFAKVQQDVYGNATFGWAYWTLQ
Full Sequence
Protein Sequence     Length: 455     Download
MNLGGWLVTE GWIKPSLFYG IPNNGTMDGT QLHFMSVTQK RYLIADKGGG AAILADRMSV    60
RLGDLQGRSK SCPTLWRINE TTFNLRVNGR QFWGVNNTGA LVATATTPGQ SETFQLVCRD    120
SDKSRVRIRA PNGFFLQVKT MASVTADYGQ NTNWSDNDPS VFVTKNVGGL QGEYQLCNGY    180
GIANATQVLM NHRNIFISKR DFNFMASSGL NAVRVPVGWW IASGDNPPPF VGGSLQFLDK    240
AFSWGQKYNI SVIVTLHDAP GSQNPYEHSA TRDGYANNTA FLAIELLNEP LAPGANLSVL    300
MKYYQDGYNA VRRYTPASYV IMSNRLNIAN QTEILQFVGS FDGAVLDVHY YNLFDKKFDN    360
LTVEQNINFV RNNRSSDLKA ITNQNGRPLT FVGEWSAAWG VQGANKTDYQ RFAKVQQDVY    420
GNATFGWAYW TLQNPFLPWN MTYMIQNGII TLKS* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00150Cellulase2.0e-8192432260+
COG2730BglC7.0e-17139439365+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEEE50844.101452427894hypothetical protein OsJ_31274 [Oryza sativa Japonica Group]
GenBankEEE50844.1014539071377hypothetical protein OsJ_31274 [Oryza sativa Japonica Group]
RefSeqNP_001064458.10145441510Os10g0370500 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002438127.1014541454hypothetical protein SORBIDRAFT_10g008480 [Sorghum bicolor]
RefSeqXP_002464704.10145446516hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1eqp_A3e-3017345045378A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans
PDB3o6a_A4e-3017345050383A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A
PDB2pbo_A5e-3017345051384A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A
PDB2pb1_A5e-3017345051384A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A
PDB1eqc_A5e-3017345045378A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DC8989053751014520
DC8992993181584520
EG3886702801273810
FF3576472821253810
CJ7223622841233810
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00111.1Aquca_010_00110.1
Brachypodium distachyonBradi2g31690.1Bradi3g38500.1
Carica papayaevm.model.supercontig_55.63evm.model.supercontig_66.87evm.model.supercontig_20.222
Citrus clementinaCiclev10025463mCiclev10026955mCiclev10025415mCiclev10000913m
Citrus sinensisorange1.1g009560morange1.1g046395morange1.1g019395morange1.1g013777morange1.1g010600m
orange1.1g009475m
Cucumis sativusCucsa.104180.2Cucsa.104180.1
Eucalyptus grandisEucgr.I00417.1Eucgr.L01170.1Eucgr.L02139.1Eucgr.I00543.1Eucgr.I00415.1
Eucgr.F00486.1Eucgr.F00489.1Eucgr.F00489.3Eucgr.F00489.2Eucgr.F00487.1
Eucgr.L01169.1Eucgr.F00488.1Eucgr.I00415.2
Fragaria vescamrna16220.1-v1.0-hybridmrna16368.1-v1.0-hybridmrna22085.1-v1.0-hybridmrna16374.1-v1.0-hybrid
Glycine maxGlyma11g37881.1Glyma18g01781.2Glyma18g01781.3Glyma18g01781.1Glyma06g47761.6
Glyma06g47761.1Glyma06g47761.5Glyma06g47761.2Glyma06g47761.8Glyma06g47761.4
Glyma06g47761.7Glyma06g47761.3Glyma13g02030.2Glyma06g47750.1Glyma13g02000.1
Glyma08g14676.1Glyma05g31460.1Glyma14g34450.1
Gossypium raimondiiGorai.009G239600.6Gorai.009G239600.5Gorai.009G239600.4Gorai.009G239600.1Gorai.009G239600.3
Gorai.009G239600.2Gorai.009G239600.7Gorai.011G110800.2Gorai.011G110800.1Gorai.003G041900.1
Gorai.003G044300.1Gorai.003G044000.4Gorai.003G044000.5Gorai.003G044200.1Gorai.003G044000.3
Gorai.003G044000.2Gorai.003G044000.1
Linum usitatissimumLus10041110Lus10036436
Malus domesticaMDP0000319015MDP0000123200MDP0000133367
Manihot esculentacassava4.1_007845mcassava4.1_026104mcassava4.1_006238m
Medicago truncatulaMedtr3g009020.1Medtr3g086750.1Medtr3g009030.1Medtr5g062290.1Medtr3g008960.1
Medtr5g062190.1Medtr3g009010.1Medtr8g091310.1
Mimulus guttatusmgv1a004896mmgv1a019918m
Oryza sativaLOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22570.1.193.483LOC_Os10g22520.1LOC_Os10g22570.1.671.954
LOC_Os10g22570.1.671.954LOC_Os10g22570.1.671.954LOC_Os05g15510.2LOC_Os05g15510.1LOC_Os08g37750.1
Panicum virgatumPavirv00046245mPavirv00011301mPavirv00018291mPavirv00046244mPavirv00011300m
Pavirv00028658mPavirv00000970mPavirv00042459mPavirv00046564m
Physcomitrella patensPp1s304_43V6.1
Phaseolus vulgarisPhvul.001G254400.1Phvul.008G171300.1Phvul.002G261800.1Phvul.008G171400.1
Picea abiesMA_10427061g0010MA_479818g0010MA_4911g0010MA_14445g0010MA_23595g0010
Populus trichocarpaPotri.007G010000.1Potri.005G167800.1Potri.007G089400.1Potri.007G089400.2Potri.005G078500.1
Potri.002G093000.1
Prunus persicappa023601mppa005425mppa019648m
Ricinus communis29810.m00014529908.m00599427889.m00017327905.m00007336339.m000016
Setaria italicaSi035257mSi006205mSi021695mSi021671mSi039329m
Si013558mSi035337m
Selaginella moellendorffii12682742658240418324801
Sorghum bicolorSb10g007500.1Sb09g008170.1Sb01g024390.1
Vitis viniferaGSVIVT01003438001GSVIVT01006372001GSVIVT01006369001GSVIVT01002801001GSVIVT01008995001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)