CAZyme Information

Basic Information
SpeciesSorghum bicolor
Cazyme IDSb10g008770.1
FamilyGH38
Protein PropertiesLength: 1185 Molecular Weight: 134639 Isoelectric Point: 7.0613
ChromosomeChromosome/Scaffold: 10 Start: 9184942 End: 9191455
Descriptiongolgi alpha-mannosidase II
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH381685070
  KVFVAPHSHNDPGWIRTVEEYYERQSRHILDTIVESLSKDSRRKFIWEEMSYLERWWRDATPKKQEAFAKLVRDGQLEIVSGGWVMNDEANSHYFAIIEQ
  IMEGNMWLNDTIGVIPKNSWSIDPFGYSSTMAYLLRRMGFHNMLIQRTHYEVKKELAMKKNLEYLWRQNWDIEETTDIFVHMMPFYSYDIPHTCGPEPAI
  CCQFDFARMRGFSYESCPWRFDPVETNPDNVKERATKLLDQYRKKSTLYRTNTLLVPLGDDFRYVSVEEAEVQFRNYEKLFDYINSNPHLNAEVKFGTLE
  DYFSTLRDEAEKINYTRPGELGSAELQGFPTLSGDFFTYA
Full Sequence
Protein Sequence     Length: 1185     Download
MPFFSGSGGG RSGALLPTTS KPKAHHHLRS KSSLSAPASS RRRGGGLHSA SSPYSRRALC    60
LAATAFAALF ILAFLRLGFP SSRSAALSSP ARPRARLTRR PAFRLRDSAA AEAAAAAVAA    120
RIGREAPVDI TTRDLYERIE FSDEDGGAWK QGWEVKYRGD EWDAEKLKVF VAPHSHNDPG    180
WIRTVEEYYE RQSRHILDTI VESLSKDSRR KFIWEEMSYL ERWWRDATPK KQEAFAKLVR    240
DGQLEIVSGG WVMNDEANSH YFAIIEQIME GNMWLNDTIG VIPKNSWSID PFGYSSTMAY    300
LLRRMGFHNM LIQRTHYEVK KELAMKKNLE YLWRQNWDIE ETTDIFVHMM PFYSYDIPHT    360
CGPEPAICCQ FDFARMRGFS YESCPWRFDP VETNPDNVKE RATKLLDQYR KKSTLYRTNT    420
LLVPLGDDFR YVSVEEAEVQ FRNYEKLFDY INSNPHLNAE VKFGTLEDYF STLRDEAEKI    480
NYTRPGELGS AELQGFPTLS GDFFTYADRN QDYWSGYYVS RPFFKAVDRV LEQTLRASEI    540
LGSFVLGYCQ KFQCAKLPIS FSHKLTAARR NLALFQHHDG VTGTAKDHVV VDYGTRMHTS    600
LQDLQLFMSR AVEVLLGDFH DRSDPTLLSH FEPVQERSKY DVQPVHRVLH PDEGKAQSVV    660
FFNPLEQTRD EVVMVVVSTP DVSVLNSNGS CLPSQVSPEW QFVSNEKIST GRHRLYWRAS    720
VPPLGLETYY VVTGQDCEKA IPAVVKRYTA AQEFPCPEPY HCSKLEGKTV EMKNSNYTLS    780
FDTSHGLLQT VTRHKDGEQT VIGEEIGMYR SHGSGAYLFK PVGEARSIVE GGGHFILTEG    840
PLVQEAHSLP KTEWHESPLS HSTRMYNCGD SVQDMLIEKE YHVELVGHAF NDKELIVRYK    900
TDIDNQRIFY SDLNGFQMSR RQTYDKIPLQ GNYYPMPSLA FLQDSHGKRF SVHSKQSLGA    960
ASLKNGWLEI MLDRRLVQDD GRGLGQGVMD NRPMNVIFHL LMESNVSALP KTHSLLTLQP    1020
SLLSHRVGAH LNYPMHAFMS KKPHGKSFKL AQQSFAPLAA SLPCDVHIVN LKVPQPLRFP    1080
HTEAAEPRFA VLLQRRGWDA SYCKRGGLQC TTVGEEPVNL FYMFKDLSAV NVKATSLNLL    1140
HDDPEMLGYL EQIGDVAQEG NVLISPMEIQ AYKLDLQPPS TQEE* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00451GH38N_AMII_euk8.0e-109167453288+
cd11667GH38N_Man2A24.0e-152167518352+
cd11666GH38N_Man2A12.0e-161167518352+
PLN02701PLN02701012811771052+
cd10809GH38N_AMII_GMII_SfManIII_like0166518353+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559alpha-mannosidase activity
GO:0005975carbohydrate metabolic process
GO:0006013mannose metabolic process
GO:0008270zinc ion binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAF19191.20154118411032Os06g0245700 [Oryza sativa Japonica Group]
GenBankEEC80313.10781184561150hypothetical protein OsI_22355 [Oryza sativa Indica Group]
GenBankEEE65435.101381184471083hypothetical protein OsJ_20797 [Oryza sativa Japonica Group]
RefSeqNP_001057277.101118411173Os06g0245700 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002438145.101118411184hypothetical protein SORBIDRAFT_10g008770 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3eju_A01281172411039A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3ejt_A01281172411039A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3ejs_A01281172411039A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3ejr_A01281172411039A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
PDB3ejq_A01281172411039A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FL7143862732545260
CB6620862812985780
JG90463928490211850
JG90757228587911630
GR3180372681273940
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_00345.1.265.483Aquca_002_00345.1.265.483Aquca_006_00230.1Aquca_006_00257.5Aquca_006_00257.9
Aquca_006_00257.8Aquca_006_00257.7Aquca_006_00257.6Aquca_006_00257.4Aquca_006_00257.3
Aquca_006_00257.2Aquca_006_00257.1Aquca_043_00016.7Aquca_043_00016.8Aquca_043_00016.6
Aquca_043_00016.5Aquca_043_00016.4Aquca_043_00016.3Aquca_043_00016.2Aquca_043_00016.1
Aquca_043_00019.2Aquca_043_00019.1Aquca_043_00018.1Aquca_056_00071.1Aquca_002_00345.1.162.261
Aquca_002_00345.1.162.261
Arabidopsis lyrata488339488225497001484445
Arabidopsis thalianaAT5G14950.1AT5G66150.1AT5G13980.3AT5G13980.2AT5G13980.1
AT3G26720.2AT3G26720.1
Brachypodium distachyonBradi1g44550.1Bradi3g21117.1Bradi4g17327.1Bradi4g17317.1
Brassica rapaBra023496Bra006275Bra037183Bra006227Bra025225
Carica papayaevm.model.supercontig_6.275evm.model.supercontig_70.70evm.model.supercontig_2646.1evm.TU.contig_36966.1evm.model.supercontig_70.69
Capsella rubellaCarubv10000075mCarubv10002909mCarubv10027738mCarubv10016625m
Citrus clementinaCiclev10014083mCiclev10017635mCiclev10024829mCiclev10024800mCiclev10030627m
Ciclev10014156mCiclev10014160mCiclev10014123m
Citrus sinensisorange1.1g002547morange1.1g002518morange1.1g002134morange1.1g001061morange1.1g015028m
orange1.1g002366morange1.1g004057morange1.1g001910morange1.1g001850morange1.1g002764m
orange1.1g002170morange1.1g002162morange1.1g002383morange1.1g001963morange1.1g001813m
orange1.1g002938morange1.1g002542morange1.1g002064morange1.1g002056morange1.1g002046m
orange1.1g002036m
Cucumis sativusCucsa.339310.1Cucsa.043720.1Cucsa.188400.2Cucsa.188400.1
Eucalyptus grandisEucgr.J02166.1Eucgr.L01536.1Eucgr.J02456.1Eucgr.K02195.1Eucgr.J02455.3
Eucgr.J02455.2Eucgr.J02455.1Eucgr.I01600.1Eucgr.G01931.1Eucgr.J02460.1
Eucgr.J02454.1Eucgr.L01537.1Eucgr.J02457.1Eucgr.J02459.2Eucgr.J02459.1
Fragaria vescamrna28330.1-v1.0-hybridmrna14585.1-v1.0-hybridmrna01394.1-v1.0-hybrid.37.348mrna01394.1-v1.0-hybrid.37.348mrna06416.1-v1.0-hybrid.39.351
mrna06416.1-v1.0-hybrid.39.351mrna14589.1-v1.0-hybrid.71.344
Glycine maxGlyma13g04761.3Glyma13g04761.2Glyma19g01890.1Glyma13g04761.1Glyma02g05240.2
Glyma02g05240.1Glyma16g23600.1Glyma01g36980.1Glyma06g17270.1Glyma04g37790.1
Glyma19g27660.2Glyma19g27660.1Glyma16g05240.2Glyma16g05240.1
Gossypium raimondiiGorai.001G258600.2Gorai.001G258600.1Gorai.006G027500.1Gorai.003G008600.2Gorai.003G008600.1
Gorai.006G000300.3Gorai.006G000300.2Gorai.006G000300.1Gorai.012G082700.6Gorai.012G082700.9
Gorai.012G082700.8Gorai.012G082700.7Gorai.012G082700.5Gorai.012G082700.4Gorai.012G082700.3
Gorai.012G082700.2Gorai.012G082700.10Gorai.012G082700.1Gorai.003G116600.2Gorai.003G116600.1
Linum usitatissimumLus10014507Lus10015337.248.571Lus10015337.248.571Lus10032179Lus10039457
Lus10012578Lus10035111Lus10012577Lus10036074Lus10025960
Lus10014259Lus10041516Lus10015337.158.248Lus10015337.158.248
Malus domesticaMDP0000888429MDP0000267909MDP0000250936MDP0000139458MDP0000274501
MDP0000274500MDP0000409920MDP0000163211MDP0000657082MDP0000211018
Manihot esculentacassava4.1_000571mcassava4.1_001602mcassava4.1_000993mcassava4.1_000971mcassava4.1_000869m
cassava4.1_001123mcassava4.1_001106m
Medicago truncatulaMedtr4g071680.1Medtr6g008850.1Medtr8g075330.1Medtr7g084040.1Medtr3g098650.2
Medtr3g098650.1Medtr7g084030.1
Mimulus guttatusmgv1a000435mmgv1a000658mmgv1a000852mmgv1a000690m
Oryza sativaLOC_Os06g13650.2LOC_Os06g13650.1LOC_Os06g13650.3LOC_Os11g32260.2LOC_Os11g32260.1
LOC_Os10g05069.2LOC_Os10g05069.1LOC_Os10g05069.3
Panicum virgatumPavirv00027286mPavirv00014532mPavirv00024149mPavirv00025946mPavirv00065120m
Physcomitrella patensPp1s10_34V6.1Pp1s77_136V6.1Pp1s129_147V6.1
Phaseolus vulgarisPhvul.004G022500.1Phvul.003G264400.1Phvul.001G084400.1Phvul.002G107300.1Phvul.001G084700.1
Phvul.009G161600.1
Picea abiesMA_10434251g0010MA_879613g0010MA_4107059g0010
Populus trichocarpaPotri.017G073900.2Potri.017G073900.1Potri.001G350400.2Potri.001G350400.1Potri.014G143600.1
Potri.014G143600.2Potri.007G056300.1Potri.002G238200.2Potri.002G238200.1Potri.012G106500.2
Potri.012G106500.1
Prunus persicappa000458mppa021513mppa000707mppa000755mppa000717m
Ricinus communis29822.m00342029868.m00034130131.m00698230131.m00698130147.m014412
Setaria italicaSi005719mSi038673mSi025964mSi034056mSi025881m
Selaginella moellendorffii104910154366266756410022178241
Sorghum bicolorSb01g026405.1Sb05g019600.1Sb01g026390.1
Thellungiella halophilaThhalv10012487mThhalv10012612mThhalv10012546mThhalv10003575mThhalv10003577m
Vitis viniferaGSVIVT01032586001GSVIVT01018752001GSVIVT01032988001GSVIVT01008340001GSVIVT01008642001
GSVIVT01032989001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)