| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g008880.1 |
| Family | GH9 |
| Protein Properties | Length: 374 Molecular Weight: 40731.5 Isoelectric Point: 7.9584 |
| Chromosome | Chromosome/Scaffold: 10 Start: 9326064 End: 9328116 |
| Description | glycosyl hydrolase 9B8 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 4 | 346 | 0 |
| SRQAYKVDRDRPGSDVAGETAAAMAAASMVFREHNPHYASLLLHHALQLFEFADKYRGKYDSSIAEVKSYYASVSGYHDELLWAALWLHRATGRPHYLDY VVHNADDFGGTGWAITEFSWDVKYAGVQILAARLLLSGEHSPRHRETLEQYRAKAEHYVCACLGKNAAADGNVERSPGGMLYVRQWNNMQYVTSAAFLLS VYSGYLSSSSSSSSSSVTCGAGGEAAAAASAGEVFALARAQVDYVLGSNPRGMSYLVGYGARFPARVHHRAASIVPYKHSKEFIGCAQGFDDWFIRKGAN PNVVVGAIVGGPDRRDRFRDQRENYMQTEACTYNTAPMVGMFA | |||
| Full Sequence |
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| Protein Sequence Length: 374 Download |
| MTTSRQAYKV DRDRPGSDVA GETAAAMAAA SMVFREHNPH YASLLLHHAL QLFEFADKYR 60 GKYDSSIAEV KSYYASVSGY HDELLWAALW LHRATGRPHY LDYVVHNADD FGGTGWAITE 120 FSWDVKYAGV QILAARLLLS GEHSPRHRET LEQYRAKAEH YVCACLGKNA AADGNVERSP 180 GGMLYVRQWN NMQYVTSAAF LLSVYSGYLS SSSSSSSSSV TCGAGGEAAA AASAGEVFAL 240 ARAQVDYVLG SNPRGMSYLV GYGARFPARV HHRAASIVPY KHSKEFIGCA QGFDDWFIRK 300 GANPNVVVGA IVGGPDRRDR FRDQRENYMQ TEACTYNTAP MVGMFAMLNR LARDEAAAAA 360 SQPGGETATS VNR* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 4.0e-99 | 1 | 346 | 348 | + Glycosyl hydrolase family 9. | ||
| PLN00119 | PLN00119 | 1.0e-103 | 1 | 348 | 348 | + endoglucanase | ||
| PLN02340 | PLN02340 | 9.0e-130 | 1 | 352 | 353 | + endoglucanase | ||
| PLN02171 | PLN02171 | 8.0e-144 | 1 | 348 | 348 | + endoglucanase | ||
| PLN02420 | PLN02420 | 2.0e-155 | 1 | 348 | 348 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY87457.1 | 0 | 1 | 355 | 165 | 514 | hypothetical protein OsI_08866 [Oryza sativa Indica Group] |
| RefSeq | NP_001048062.1 | 0 | 1 | 355 | 187 | 536 | Os02g0738600 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q6Z5P2 | 0 | 1 | 355 | 165 | 514 | GUN7_ORYSJ RecName: Full=Endoglucanase 7; AltName: Full=Endo-1,4-beta glucanase 7; AltName: Full=OsGLU10; Flags: Precursor |
| RefSeq | XP_002438149.1 | 0 | 1 | 373 | 1 | 373 | hypothetical protein SORBIDRAFT_10g008880 [Sorghum bicolor] |
| RefSeq | XP_002454315.1 | 0 | 1 | 370 | 195 | 559 | hypothetical protein SORBIDRAFT_04g028520 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 1 | 348 | 133 | 429 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ksc_A | 0 | 1 | 348 | 133 | 429 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ks8_A | 0 | 1 | 348 | 133 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 1.96182e-44 | 1 | 351 | 155 | 462 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 9e-37 | 1 | 348 | 134 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FL931053 | 267 | 89 | 355 | 0 |
| EE166305 | 299 | 1 | 297 | 0 |
| DY274955 | 343 | 13 | 355 | 0 |
| GR331050 | 260 | 81 | 340 | 0 |
| GR334562 | 269 | 102 | 370 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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