| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g009270.1 |
| Family | GH9 |
| Protein Properties | Length: 563 Molecular Weight: 60718.4 Isoelectric Point: 9.113 |
| Chromosome | Chromosome/Scaffold: 10 Start: 10075853 End: 10079312 |
| Description | glycosyl hydrolase 9B1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 90 | 551 | 0 |
| DYGDALRKSILFFEGQRSGRLPPTQRLRWRQDSAIHDGADAGVDLTGGYYDAGDNVKFGFPMAFTATLISWGLIDFGRSFGAHESDARAALRWATDYLLK ATSTPGVVYVQVGDASRDHACWERPEDMDTPRTVYKVDASHPGSDVAAETAAALAAASIVFREGGGDPGYAARLLERAVEVFAFADAHRGAYSGSLRDAV CPCYCDYDGYQDELLWGAAWLHRASRRREYREYIKRNEVALGASVSINEFGWDNKHAGINVLISKEVLMGKDEYFRSFRENADNFICSLLPGISGHPQIQ YSPGGLLFKVGNSNMQHVTSLSFLLLAYSNYLSHADARVSCGSGASAASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGPRYPLRIHHRASSLPSVSAHP ARIGCKAGAAYYGSPRPNPNLLVGAVVGGPSNSTDAFPDARAVFQQSEPTTYINAPLLALLA | |||
| Full Sequence |
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| Protein Sequence Length: 563 Download |
| MSVRGVGSGA RAPINSTAPR AGLRTAAHAQ HKHQPTNQPT KPPTPRAKAQ HRGFVPMARP 60 VSSSTAKAMS VVVVALLLAA SSSAVLAVHD YGDALRKSIL FFEGQRSGRL PPTQRLRWRQ 120 DSAIHDGADA GVDLTGGYYD AGDNVKFGFP MAFTATLISW GLIDFGRSFG AHESDARAAL 180 RWATDYLLKA TSTPGVVYVQ VGDASRDHAC WERPEDMDTP RTVYKVDASH PGSDVAAETA 240 AALAAASIVF REGGGDPGYA ARLLERAVEV FAFADAHRGA YSGSLRDAVC PCYCDYDGYQ 300 DELLWGAAWL HRASRRREYR EYIKRNEVAL GASVSINEFG WDNKHAGINV LISKEVLMGK 360 DEYFRSFREN ADNFICSLLP GISGHPQIQY SPGGLLFKVG NSNMQHVTSL SFLLLAYSNY 420 LSHADARVSC GSGASAASPV QLRRVAKRQV DYILGDNPLR MSYMVGYGPR YPLRIHHRAS 480 SLPSVSAHPA RIGCKAGAAY YGSPRPNPNL LVGAVVGGPS NSTDAFPDAR AVFQQSEPTT 540 YINAPLLALL AYFSQHPDPA QH* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02308 | PLN02308 | 0 | 89 | 560 | 472 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 89 | 555 | 467 | + endoglucanase | ||
| PLN03009 | PLN03009 | 0 | 89 | 560 | 475 | + cellulase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 90 | 551 | 468 | + Glycosyl hydrolase family 9. | ||
| PLN02613 | PLN02613 | 0 | 90 | 551 | 466 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL54781.1 | 0 | 89 | 562 | 27 | 504 | unknown [Zea mays] |
| GenBank | EAZ00403.1 | 0 | 74 | 561 | 8 | 491 | hypothetical protein OsI_22418 [Oryza sativa Indica Group] |
| RefSeq | NP_001057318.1 | 0 | 74 | 561 | 8 | 491 | Os06g0256900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001136728.1 | 0 | 89 | 562 | 27 | 500 | hypothetical protein LOC100216867 [Zea mays] |
| RefSeq | XP_002438182.1 | 0 | 1 | 562 | 1 | 562 | hypothetical protein SORBIDRAFT_10g009270 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 89 | 551 | 3 | 426 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ksc_A | 0 | 89 | 551 | 3 | 426 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ks8_A | 0 | 89 | 551 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 90 | 551 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 90 | 551 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO788388 | 405 | 154 | 556 | 0 |
| EE288895 | 278 | 277 | 554 | 0 |
| DR824510 | 280 | 89 | 368 | 0 |
| DY298091 | 334 | 90 | 423 | 0 |
| DR822886 | 304 | 50 | 350 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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