| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g011830.1 |
| Family | GH5 |
| Protein Properties | Length: 439 Molecular Weight: 49296.3 Isoelectric Point: 7.7993 |
| Chromosome | Chromosome/Scaffold: 10 Start: 17489494 End: 17493064 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 65 | 387 | 6.2e-30 |
| TGAPIYVNGWNSYWLLSARSPALSAEMLRRGRRMGLTVCRTWAFSDGGPGALQISPGRFSEPVFQMLDYVIYEARRNHVRLILCLVNNLDNFGGKAQYVQ WAQAAGVNVTNSMDSFFSHPTIKYYYMEYVKAILTRRNSYSGIKYCDEPAIFAWELMNEPRCVSNSSGPHIQAWIEEMSAYIKSLDTKHLITVGIEGFYG PGRGDRLGVNPGDWAASLCSDFIQNSAVKDIDFASVHAYPDSWLPKASMEEKVKYLSVWVDSHLNDSEYILRKPVLFSEVGYLQHAEADNTLDGDTLLKV VYDKLYNSAKKLQAGGGALIWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 439 Download |
| MWRGTRMYSL LGVFLLLSLA YLNWLPGRDP SSAGGPGGFK LPVPWLQPRM SFVGRAGTHF 60 VDAVTGAPIY VNGWNSYWLL SARSPALSAE MLRRGRRMGL TVCRTWAFSD GGPGALQISP 120 GRFSEPVFQM LDYVIYEARR NHVRLILCLV NNLDNFGGKA QYVQWAQAAG VNVTNSMDSF 180 FSHPTIKYYY MEYVKAILTR RNSYSGIKYC DEPAIFAWEL MNEPRCVSNS SGPHIQAWIE 240 EMSAYIKSLD TKHLITVGIE GFYGPGRGDR LGVNPGDWAA SLCSDFIQNS AVKDIDFASV 300 HAYPDSWLPK ASMEEKVKYL SVWVDSHLND SEYILRKPVL FSEVGYLQHA EADNTLDGDT 360 LLKVVYDKLY NSAKKLQAGG GALIWQLMVE GMQMYHDNFS MVARDRPSTY KLINEQSCRL 420 QRLYGTEGDP SWQCSLPP* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 0.0001 | 141 | 345 | 226 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 7.0e-22 | 76 | 410 | 342 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ36778.1 | 0 | 40 | 395 | 41 | 398 | hypothetical protein OsJ_21115 [Oryza sativa Japonica Group] |
| GenBank | EEC80480.1 | 0 | 40 | 379 | 41 | 382 | hypothetical protein OsI_22707 [Oryza sativa Indica Group] |
| RefSeq | NP_001057484.1 | 0 | 40 | 361 | 41 | 362 | Os06g0311600 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q0DCM5 | 0 | 40 | 438 | 41 | 440 | MAN6_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 6; AltName: Full=Beta-mannanase 6; AltName: Full=Endo-beta-1,4-mannanase 6; AltName: Full=OsMAN6; Flags: Precursor |
| RefSeq | XP_002436944.1 | 0 | 1 | 438 | 1 | 438 | hypothetical protein SORBIDRAFT_10g011830 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 51 | 423 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 57 | 415 | 18 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 57 | 415 | 18 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 57 | 415 | 18 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 57 | 415 | 18 | 378 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
