| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g017820.1 |
| Family | CBM45 |
| Protein Properties | Length: 1470 Molecular Weight: 164265 Isoelectric Point: 5.9211 |
| Chromosome | Chromosome/Scaffold: 10 Start: 37957689 End: 37970316 |
| Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM45 | 117 | 192 | 5.1e-24 |
| LHWGVLRPDKRDWILPSRQPDGTTVYKNRALRTPFVKSGDNSTLRIEIDDPAVQAIEFLIFGETQNKWFKNNGQNF | |||
| CBM45 | 460 | 537 | 4.1e-24 |
| LHWSLAKKAGEWKAPPSNILPSGSKLLDMACETEFTRSELDGLCYQVVEIELDDGGYKGMPFVLRSGETWIKNNGSDF | |||
| Full Sequence |
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| Protein Sequence Length: 1470 Download |
| MTGFSAAASA AAAAERCALA IRARPAASSP AKRQQQSASL RRSGGQRRPT TLAASRRSPV 60 VVPRAIATSA DRASHDLVGK FTLDSNSELL VAVNPAPQGL VSVIGLEVTN TSGSLILHWG 120 VLRPDKRDWI LPSRQPDGTT VYKNRALRTP FVKSGDNSTL RIEIDDPAVQ AIEFLIFGET 180 QNKWFKNNGQ NFQIQLQSSR HQGNGASGAS SSATSTLVPE DLVQIQAYLR WERKGKQSYT 240 PEQEKEEYEA ARAELIEELN RGVSLEKLRA KLTKTPEAPE SDERKSPASR MPVDKLPEDL 300 VQVQAYIRWE KAGKPNYPPE KQLVELEEAR KELQAEVDKG ISIDQLRQKI LKGNIESKVS 360 KQLKNKKYFS VERIQRKKRD IMQLLSKHKH TVMEEKVEVA PKQPTVLDLF TKSLHEKDGC 420 EVLSRKLFKF GDKEILAIST KVQNKTEVHL ATNHTEPLIL HWSLAKKAGE WKAPPSNILP 480 SGSKLLDMAC ETEFTRSELD GLCYQVVEIE LDDGGYKGMP FVLRSGETWI KNNGSDFFLD 540 FSTRDTRNIK LKDNGDAGKG TAKALLERIA DLEEDAQRSL MHRFNIAADL ADEARDAGLL 600 GIVGLFVWIR FMATRQLTWN KNYNVKPREI SKAQDRFTDD LENMYRTYPQ YREILRMIMA 660 AVGRGGEGDV GQRIRDEILV IQRNNDCKGG MMEEWHQKLH NNTSPDDVVI CQALIDYIKN 720 DFDISVYWDT LNKNGITKER LLSYDRAIHS EPNFRSEQKE GLLRDLGNYM RSLKAVHSGA 780 DLESAIATCM GYKSEGEGFM VGVQINPVKG LPSGFPELLE FVLDHVEDKS AEPLLEGLLE 840 ARVDLRPLLL DSPERMKDLI FLDIALDSTF RTAIERSYEE LNDAAPEKIM YFISLVLENL 900 AFSIDDNEDI LYCLKGWNQA LEMAKQKDDQ WALYAKAFLD RIRLALASKG EQYHNMMQPS 960 AEYLGSLLSI DKWAVNIFTE EIIRGGSAAT LSALLNRFDP VLRNVANLGS WQVISPVEVS 1020 GYVVVVDELL AVQNKSYDKP TILVAKSVKG EEEIPDGVVG VITPDMPDVL SHVSVRARNS 1080 KVLFATCFDH TTLSELEGYD QKLLSFKPTS ADITYREITE SELQQSSSPN AEVGHAVPSI 1140 SLAKKKFLGK YAISAEEFTE EMVGAKSRNI AYLKGKVPSW VGVPTSVAIP FGTFEKVLSD 1200 GLNKEVAQTI EKLKIRLAQE DFSALGEIRK AVLNLTAPMQ LVNELKERML GSGMPWPGDE 1260 GNRRWEQAWM AIKKVWASKW NERAYFSTRK VKLNHEYLSM AVLVQEVVNA DYAFVIHTTN 1320 PSSGDSSEIY AEVVKGLGET LVGAYPGRAM SFVCKKDDLD SPKLLGYPSK PIGLFIRRSI 1380 IFRSDSNGED LEGYAGAGLY DSVPMDEEDE VVLDYTTDPL IVDRGFRNSI LSSIARAGHA 1440 IEELYGSPQD VEGVVKDGKI YVVQTRPQM* 1500 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02784 | PLN02784 | 2.0e-8 | 91 | 199 | 111 | + alpha-amylase | ||
| COG0574 | PpsA | 1.0e-9 | 1263 | 1467 | 208 | + Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] | ||
| PRK06464 | PRK06464 | 3.0e-14 | 1271 | 1467 | 212 | + phosphoenolpyruvate synthase; Validated | ||
| TIGR01418 | PEP_synth | 1.0e-15 | 1161 | 1468 | 344 | + phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes [Energy metabolism, Glycolysis/gluconeogenesis]. | ||
| pfam01326 | PPDK_N | 1.0e-35 | 1159 | 1468 | 337 | + Pyruvate phosphate dikinase, PEP/pyruvate binding domain. This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005524 | ATP binding |
| GO:0016301 | kinase activity |
| GO:0016310 | phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC80673.1 | 0 | 1 | 1469 | 1 | 1460 | hypothetical protein OsI_23085 [Oryza sativa Indica Group] |
| GenBank | EEE65768.1 | 0 | 50 | 1469 | 84 | 1496 | hypothetical protein OsJ_21446 [Oryza sativa Japonica Group] |
| RefSeq | NP_001057699.1 | 0 | 50 | 1469 | 5 | 1414 | Os06g0498400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002270485.1 | 0 | 27 | 1469 | 39 | 1470 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002438419.1 | 0 | 1 | 1469 | 1 | 1469 | hypothetical protein SORBIDRAFT_10g017820 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation II | RXN-12203 | EC-2.7.9.4 | α-glucan, water dikinase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777523 | 898 | 573 | 1470 | 0 |
| HO794398 | 752 | 719 | 1470 | 0 |
| HO794398 | 142 | 578 | 719 | 0 |
| FL698910 | 268 | 555 | 822 | 0 |
| JG961045 | 285 | 1170 | 1454 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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