| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g020900.1 |
| Family | GH17 |
| Protein Properties | Length: 409 Molecular Weight: 43721.2 Isoelectric Point: 6.7904 |
| Chromosome | Chromosome/Scaffold: 10 Start: 45809541 End: 45813467 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 40 | 358 | 0 |
| LGINYGQVGNNLPAPPQVVQLLSSLRIGKVRIYDVNPQVLTAFAGTGIELIVTVPDDLVPGMAGSASQALQWLSASVRPYFPAARVTGIAVGNEVFTGDD EQLKASLVPAMRNLHAALAQLGMDAYVRVSTANSLAVLATSYPPSQGVFTQAAAPYMAQLLRFLAETSAPFWINAYPYFAYKDDPTKVSLDYALSNPSHV GAVDPFTKLQYTSMLYAQVDAVTFAAARLGYGNVPVHVSETGWPSKGDADEAGATVENARQYNRNLLMRQVSGEGTPLRPRLRLEVYLFALFNEDMKPGP TSERNYGLYQPDMSMVYNV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 409 Download |
| MALFALSSLK PTSRLVIICA LLCIFLLSSE VSLVRQATAL GINYGQVGNN LPAPPQVVQL 60 LSSLRIGKVR IYDVNPQVLT AFAGTGIELI VTVPDDLVPG MAGSASQALQ WLSASVRPYF 120 PAARVTGIAV GNEVFTGDDE QLKASLVPAM RNLHAALAQL GMDAYVRVST ANSLAVLATS 180 YPPSQGVFTQ AAAPYMAQLL RFLAETSAPF WINAYPYFAY KDDPTKVSLD YALSNPSHVG 240 AVDPFTKLQY TSMLYAQVDA VTFAAARLGY GNVPVHVSET GWPSKGDADE AGATVENARQ 300 YNRNLLMRQV SGEGTPLRPR LRLEVYLFAL FNEDMKPGPT SERNYGLYQP DMSMVYNVGL 360 SQLSTTNAAS LSLATSPAAR TTDVRKDFAG LSVAVSVAIL LITQALLL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-7 | 116 | 351 | 240 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-97 | 40 | 358 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD54223.1 | 0 | 18 | 362 | 15 | 360 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
| GenBank | EEC80746.1 | 0 | 18 | 388 | 5 | 380 | hypothetical protein OsI_23229 [Oryza sativa Indica Group] |
| RefSeq | NP_001057782.1 | 0 | 18 | 405 | 5 | 391 | Os06g0531000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130652.1 | 0 | 5 | 404 | 4 | 401 | hypothetical protein LOC100191753 [Zea mays] |
| RefSeq | XP_002437077.1 | 0 | 1 | 387 | 1 | 387 | hypothetical protein SORBIDRAFT_10g020900 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 40 | 358 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 40 | 358 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 40 | 360 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 40 | 361 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 40 | 361 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
