| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g021130.1 |
| Family | CBM43 |
| Protein Properties | Length: 175 Molecular Weight: 17690.9 Isoelectric Point: 5.4277 |
| Chromosome | Chromosome/Scaffold: 10 Start: 46548661 End: 46553984 |
| Description | plasmodesmata callose-binding protein 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 32 | 118 | 9.9e-32 |
| WCVAKNNAEDGALQSAIDWACSVDGGRADCAAIQQGGACFDPPDLQQHASYAFNDYFLRSGGAASPAACDFSGAAALTALNPSHGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 175 Download |
| MLAASLLALR LLLLVGTAAA GAVGMSGGGQ LWCVAKNNAE DGALQSAIDW ACSVDGGRAD 60 CAAIQQGGAC FDPPDLQQHA SYAFNDYFLR SGGAASPAAC DFSGAAALTA LNPSHGSCVF 120 PSSASPKNGS FTGTTTYGPT GADFSNSFSW KLNFWSLLLH ISSSVMFCAA THVL* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 6.0e-16 | 32 | 106 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-31 | 32 | 120 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001057795.1 | 0 | 26 | 167 | 35 | 176 | Os06g0537700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001132372.1 | 0 | 1 | 174 | 1 | 176 | hypothetical protein LOC100193817 [Zea mays] |
| RefSeq | NP_567060.1 | 3e-36 | 9 | 154 | 11 | 164 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| RefSeq | XP_002438507.1 | 0 | 1 | 174 | 1 | 174 | hypothetical protein SORBIDRAFT_10g021130 [Sorghum bicolor] |
| RefSeq | XP_002525141.1 | 2e-37 | 24 | 145 | 25 | 147 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-17 | 32 | 125 | 13 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
