| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g022620.1 |
| Family | GH35 |
| Protein Properties | Length: 726 Molecular Weight: 79149.2 Isoelectric Point: 7.9288 |
| Chromosome | Chromosome/Scaffold: 10 Start: 50658177 End: 50662476 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 39 | 341 | 0 |
| VINGQRRILISGSIHYPRSTPEMWPDLLQKAKDGGLDVVQTYVFWNGHEPQQGQYYFGDRYDLVRFVKLAKQAGLFVHLRIGPYVCAEWNFGGFPVWLKY VPGVSFRTDNAPFKAAMQAFVEKIVSMMKAEGLFEWQGGPIILAQVENEYGPMESVMGGGAKPYANWAAKMAVATGAGVPWVMCKQDDAPDPVINTCNGF YCDYFSPNSNSKPTMWTEAWTGWFTAFGGAVPHRPVEDMAFAVARFIQKGGSFVNYYMYHGGTNFDRTSGGPFIATSYDYDAPIDEYGLLRQPKWGHLRD LHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 726 Download |
| MMSGGVLFLA LLAAAAALAI IVAPSPANAA VSYDHRAVVI NGQRRILISG SIHYPRSTPE 60 MWPDLLQKAK DGGLDVVQTY VFWNGHEPQQ GQYYFGDRYD LVRFVKLAKQ AGLFVHLRIG 120 PYVCAEWNFG GFPVWLKYVP GVSFRTDNAP FKAAMQAFVE KIVSMMKAEG LFEWQGGPII 180 LAQVENEYGP MESVMGGGAK PYANWAAKMA VATGAGVPWV MCKQDDAPDP VINTCNGFYC 240 DYFSPNSNSK PTMWTEAWTG WFTAFGGAVP HRPVEDMAFA VARFIQKGGS FVNYYMYHGG 300 TNFDRTSGGP FIATSYDYDA PIDEYGLLRQ PKWGHLRDLH KAIKQAEPAL VSGDPTIQTI 360 GNYEKAYVYK SSSGACAAFL SNYHTNAAAR VVFNGRRYDL PAWSISVLPD CRTAVFNTAT 420 VSSPSAPARM TPAGGFSWQS YSEATNSLDD RAFTKDGLVE QLSMTWDKSD YLWYTTYVNI 480 NSNEQFLKSG QWPQLTIYSA GHALQVFVNG QSYGAAYGGY DSPKLTYSGY VKMWQGSNKI 540 SILSAAVGLP NQGTHYEAWN VGVLGPVTLS GLNEGKRDLS NQKWTYQIGL HGESLGVHSV 600 AGSSSVEWGS AAGKQPLTWH KAYFNAPSGN APVALDMSSM GKGQAWVNGH HIGRYWSYKA 660 TGGSCGGCSY AGTYSETKCQ TGCGDVSQRY YHVPRSWLNP SGNLLVVLEE FGGDLSGVKL 720 VTRTT* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 6.0e-22 | 31 | 333 | 354 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-156 | 39 | 343 | 320 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 25 | 725 | 706 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG30563.1 | 0 | 28 | 724 | 25 | 722 | beta-galactosidase precursor [Zea mays] |
| GenBank | EAZ01416.1 | 0 | 34 | 725 | 27 | 717 | hypothetical protein OsI_23450 [Oryza sativa Indica Group] |
| RefSeq | NP_001057920.1 | 0 | 34 | 725 | 25 | 715 | Os06g0573600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130532.1 | 0 | 28 | 724 | 25 | 721 | hypothetical protein LOC100191631 [Zea mays] |
| RefSeq | XP_002437187.1 | 0 | 29 | 725 | 29 | 725 | hypothetical protein SORBIDRAFT_10g022620 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.4013e-45 | 39 | 339 | 16 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.002 | 495 | 712 | 400 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1.99993e-41 | 31 | 424 | 11 | 412 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1.99993e-41 | 31 | 424 | 11 | 412 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
