| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g023480.1 |
| Family | GT14 |
| Protein Properties | Length: 441 Molecular Weight: 49070 Isoelectric Point: 7.4969 |
| Chromosome | Chromosome/Scaffold: 10 Start: 52132209 End: 52136266 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 94 | 349 | 0 |
| IAYLISGSAGDGAALRRTLRALYHPANTYVVHLDLEAPAAERAELAAAVRADTVYARFRNVKVVTRANLVTYRGPTMVANTLHAAAILLREGGDWDWFIN LSASDYPLVTQDDLLHVLSELPRQLNFIEHTSDIGWKEYQRAKPVIIDPGLYSLQKSDVFWITEKRSVPTAFKLFTGSAWMMLTHQFIEYCIWGWDNLPR TVLMYYANFLSSPEGYFHTVICNVPEFRNTTVNHDLHFISWDNPPKQHPHYLTLAD | |||
| Full Sequence |
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| Protein Sequence Length: 441 Download |
| MLEAKPPSPG SGAAGAAAAH IHSHRRWAAP LLASVLLSSL LISASLFFSS SRALLLSFSP 60 LPSAASAEPL FVEAKLRQQM RAEERPARGA VPRIAYLISG SAGDGAALRR TLRALYHPAN 120 TYVVHLDLEA PAAERAELAA AVRADTVYAR FRNVKVVTRA NLVTYRGPTM VANTLHAAAI 180 LLREGGDWDW FINLSASDYP LVTQDDLLHV LSELPRQLNF IEHTSDIGWK EYQRAKPVII 240 DPGLYSLQKS DVFWITEKRS VPTAFKLFTG SAWMMLTHQF IEYCIWGWDN LPRTVLMYYA 300 NFLSSPEGYF HTVICNVPEF RNTTVNHDLH FISWDNPPKQ HPHYLTLADY DGMVNSNAPF 360 ARKFGREDPV LDKIDQELLG RQPDGFVPGG WTDVLNTTEK GKPFTVERVQ DLRPGPGVDR 420 LKKLVTGLLT QEGFDDKHCL * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 1.0e-73 | 94 | 354 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 0 | 74 | 439 | 368 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG48118.1 | 0 | 1 | 440 | 1 | 441 | acetylglucosaminyltransferase [Zea mays] |
| GenBank | ACN27730.1 | 0 | 80 | 440 | 1 | 361 | unknown [Zea mays] |
| GenBank | ACN29023.1 | 0 | 47 | 440 | 47 | 441 | unknown [Zea mays] |
| RefSeq | NP_001130420.1 | 0 | 1 | 440 | 1 | 439 | hypothetical protein LOC100191516 [Zea mays] |
| RefSeq | XP_002437247.1 | 0 | 1 | 440 | 1 | 440 | hypothetical protein SORBIDRAFT_10g023480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000000000002 | 108 | 319 | 99 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000000000002 | 108 | 319 | 99 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000000000002 | 108 | 319 | 99 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000000000002 | 108 | 319 | 99 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000000000005 | 108 | 319 | 99 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR786415 | 286 | 156 | 440 | 0 |
| FL712381 | 253 | 161 | 413 | 0 |
| CA293171 | 236 | 188 | 423 | 0 |
| CA293171 | 33 | 400 | 432 | 0.036 |
| CA293171 | 9 | 431 | 439 | 0.036 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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