y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb10g023710.1 |
Family | GH17 |
Protein Properties | Length: 393 Molecular Weight: 43401.1 Isoelectric Point: 7.2145 |
Chromosome | Chromosome/Scaffold: 10 Start: 52444127 End: 52447503 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 33 | 349 | 0 |
GINYGRIANNIPSPDKVVELLRRAKIRNVKIYDADHSVLDAFKGSGINLVIAIPNELVKDMAANTSRSMDWLNQNVQPYLPQTRIVGITVGNEVLGGQDQ SLYQPLVDAVKNVYDGLKRLHLESKIELFTPHSEAVFATSYPPSACVFKEELMAYMKPLLDFFAMIGSPFYVNAYPFLAYISDPEHIDINYALFKPNKGI VDPNTSLHYDNMFDAQIDAAYAALHAAGYDDMEVRVAETGWASSGDQNEAGASSENARTYNFNLRKRLFLRTGTPLKPKRPVKAYIFALFNENQKPGAGS ERHYGLFLPDGRISYDI |
Full Sequence |
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Protein Sequence Length: 393 Download |
MMVPRTVLLL CCCLLAFLPL GPLAVEAFVG GYGINYGRIA NNIPSPDKVV ELLRRAKIRN 60 VKIYDADHSV LDAFKGSGIN LVIAIPNELV KDMAANTSRS MDWLNQNVQP YLPQTRIVGI 120 TVGNEVLGGQ DQSLYQPLVD AVKNVYDGLK RLHLESKIEL FTPHSEAVFA TSYPPSACVF 180 KEELMAYMKP LLDFFAMIGS PFYVNAYPFL AYISDPEHID INYALFKPNK GIVDPNTSLH 240 YDNMFDAQID AAYAALHAAG YDDMEVRVAE TGWASSGDQN EAGASSENAR TYNFNLRKRL 300 FLRTGTPLKP KRPVKAYIFA LFNENQKPGA GSERHYGLFL PDGRISYDIG VSGLLPSSAS 360 SSMLFIKKVR AGGWILHYWA TVLLCIFILL GP* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 266 | 339 | 77 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-86 | 33 | 349 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF33176.1 | 0 | 26 | 389 | 37 | 399 | beta-1,3-glucanase [Triticum aestivum] |
GenBank | ACG42425.1 | 0 | 2 | 391 | 1 | 390 | hypothetical protein [Zea mays] |
RefSeq | NP_001058028.1 | 0 | 16 | 372 | 55 | 411 | Os06g0607000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130934.1 | 0 | 2 | 390 | 1 | 389 | hypothetical protein LOC100192039 [Zea mays] |
RefSeq | XP_002437258.1 | 0 | 1 | 370 | 1 | 370 | hypothetical protein SORBIDRAFT_10g023710 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 33 | 349 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 33 | 349 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 33 | 349 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 33 | 352 | 4 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 33 | 352 | 4 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |