| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g024070.1 |
| Family | GH127 |
| Protein Properties | Length: 888 Molecular Weight: 96669.4 Isoelectric Point: 6.4494 |
| Chromosome | Chromosome/Scaffold: 10 Start: 52914574 End: 52922055 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH127 | 390 | 666 | 2e-22 |
| VTGDPLYKEIATFFMDTVNSSHAYATGGTSVSEFWSDPKRLAEALTTETEESCTTYNMLKVSRHLFRWTKEVAYADYYERALINGVLSIQRGRDPGVMIY MLPQGPGRSKAKSYHGWGTQNESFWCCYGTGIESFSKLGDSIYFEEKGQKPALYIVQFIPSTFNWRTTGLTVTQKLMPLSSWDQYLQVSFSISAKTDGQF ATLNVRIPSWTSLNGAKATLNDKDLQLASPGTFLTVSKQWGSGDQLLLQLPIHLRTEAIKDDRPEYASIQAVLFGPF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 888 Download |
| MAAAPWRSAS AWAVLVAVAV AGVVTTMAKE CTNIPTELSS HTVRARLQAS PGAAEWRWRE 60 LFHEHLNPTD EAAWMDLMPP PPRGGLQTAA AADAGHHHHQ EEEELDWVML YRSLKGQQVV 120 VGGAVPASGA AAAGPFLEEV SLHDVRLDPD GDDAAYGRAQ RTNLEYLLLL DVDRLVWSFR 180 SQAALPAPGE PYGGWEKPDS ELRGHFVGHY LSATAKMWAS THNGTLAGKM SAVVDALDEC 240 QRAAGTGYLS AFPAEFFDRF EAIKPVWAPY YTIHKIMQGL LDQHVVAGNG KALGMVVAMA 300 DYFAGRVRNV IRRYSIERHW TSLNEETGGM NDVLYQLYTI THDQRHLVLA HLFDKPCFLG 360 LLAVQADSLS NFHANTHIPV VIGGQMRYEV TGDPLYKEIA TFFMDTVNSS HAYATGGTSV 420 SEFWSDPKRL AEALTTETEE SCTTYNMLKV SRHLFRWTKE VAYADYYERA LINGVLSIQR 480 GRDPGVMIYM LPQGPGRSKA KSYHGWGTQN ESFWCCYGTG IESFSKLGDS IYFEEKGQKP 540 ALYIVQFIPS TFNWRTTGLT VTQKLMPLSS WDQYLQVSFS ISAKTDGQFA TLNVRIPSWT 600 SLNGAKATLN DKDLQLASPG TFLTVSKQWG SGDQLLLQLP IHLRTEAIKD DRPEYASIQA 660 VLFGPFLLAG LTTGEWDAKT GAAAAAATDW ITPVPPGSNS QLVTLAQESG GKAFVLSAVN 720 GSLTMQERPK DSGGTDAAVH ATFRLVPQGT NSTAAATLEP LDMPGMVVTD TLTVSAEKSS 780 GALFNVVPGL AGAPGSVSLE LGSRPGCFLV AGGSGEKVQV GCTGGVKKHG NGGGDWFRQA 840 ASFARAEPMR RYHPMSFAAR GVRRSFLLEP LFTLRDEFYT IYFNLVA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 2.0e-58 | 183 | 670 | 493 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 2.0e-146 | 144 | 669 | 534 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD35522.1 | 0 | 29 | 887 | 23 | 883 | hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | EEC80970.1 | 0 | 29 | 887 | 23 | 905 | hypothetical protein OsI_23693 [Oryza sativa Indica Group] |
| RefSeq | NP_001058067.1 | 0 | 29 | 887 | 23 | 924 | Os06g0612900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002438671.1 | 0 | 1 | 887 | 1 | 887 | hypothetical protein SORBIDRAFT_10g024070 [Sorghum bicolor] |
| RefSeq | XP_002451716.1 | 0 | 29 | 887 | 33 | 888 | hypothetical protein SORBIDRAFT_04g006520 [Sorghum bicolor] |
