| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g025240.1 |
| Family | GT4 |
| Protein Properties | Length: 1010 Molecular Weight: 113050 Isoelectric Point: 7.69 |
| Chromosome | Chromosome/Scaffold: 10 Start: 54433786 End: 54443672 |
| Description | sucrose phosphate synthase 1F |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 505 | 673 | 8.40779e-45 |
| TNPRKPMILAIARPYAEKNIATLVKAFGECHPLRELANLTLIMGNREAISKMNKVSAAVLTSVLTLIDEYDLYGQVAYPKHHKHSEVPDIYRLAARTKGA FVNVAYFEQFGVTLIEAAMHGLPVIATKHGAPVEIHQVLENGLLVDPHDQHAIADALYKMLSEKQFWSR | |||
| Full Sequence |
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| Protein Sequence Length: 1010 Download |
| MYGNDNWINS YLDAILDAGK GAAAAGAGAA AAARGRGGGG GGDRPSLLLR ERGHFSPARY 60 FVEEVITGYD ETDLYKTWLR ANAMRSPQEK NTRLENMTWR IWNLARKKKE WSVHRAMVLL 120 NELCKGIEQK FQFQIDLDQF EKEEANRLSK RRLETEKPRN DATAEMSEDL FEGVKGEDAG 180 DPSVAYGDST TGNTPRISSF DKLYIVLISL HGLIRGENME LGRDSDTGGQ VKYVVELAKA 240 LSSCPGVYRV DLLTRQILAP NFDRGYGEPD EMLASTSFKN FKCERGENSG AHIIRIPFGP 300 KDKHLAKENI WPFIQEFVDG ALAHIVRMSK TIGKETGSVC PVWPAVIHGH YSSAGVAAAL 360 LSGALNVPMV FTGHFLGKDK LEGLLKQGRQ TREQINVTYK IMRRIEAEEL SLDASEIVIA 420 STRQEIEEQW NLYDGFEVML ARKLRALVKR GAHCYGRYMP RMVIIPPGVE FGQLIHDFDI 480 YGDEDNPSPA SEDPSIWFEI MRFFTNPRKP MILAIARPYA EKNIATLVKA FGECHPLREL 540 ANLTLIMGNR EAISKMNKVS AAVLTSVLTL IDEYDLYGQV AYPKHHKHSE VPDIYRLAAR 600 TKGAFVNVAY FEQFGVTLIE AAMHGLPVIA TKHGAPVEIH QVLENGLLVD PHDQHAIADA 660 LYKMLSEKQF WSRCRDNGLK NIHQFSWPEH CKNYLSRILT LGPRHPAFAC KEDQKVPVKC 720 RKHIFVIAVD SVNKEDLIQI IRNSVEATRT GTMSGSTGFV LSTSLTIAEL QSVIVRTGML 780 PTDFDAFICN SGSDIYYPSQ SSDVPSNSRV TFALDHNYRS HIEYRWGGEG LRKYLVKWAS 840 SVVERRGRTE KQIIFEDSEH SSTYCLAFRV VNPNHLPPLK ELQKLMRIQS LRCHALYNHG 900 ATRLSVIPIH ASRSQALRYL SIRWGIELPD AVVIVGETGD SDYEELFGGL HKTVILKGGF 960 NTPANRIHTV RRYPLQDVVA LDSSNIIGIE GFSTGDIRSA MQQLGIPTQ* 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02470 | sucr_synth | 1.0e-42 | 178 | 702 | 571 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03800 | GT1_Sucrose_synthase | 3.0e-121 | 204 | 696 | 494 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| TIGR02468 | sucrsPsyn_pln | 7.0e-136 | 675 | 1005 | 338 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
| TIGR02472 | sucr_P_syn_N | 9.0e-153 | 203 | 698 | 498 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| TIGR02468 | sucrsPsyn_pln | 0 | 1 | 706 | 722 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD37372.1 | 0 | 1 | 1009 | 1 | 977 | putative sucrose-phosphate synthase [Oryza sativa Japonica Group] |
| DDBJ | BAH00517.1 | 0 | 1 | 1009 | 49 | 1011 | unnamed protein product [Oryza sativa Japonica Group] |
| GenBank | EEE66101.1 | 0 | 1 | 1009 | 1 | 977 | hypothetical protein OsJ_22133 [Oryza sativa Japonica Group] |
| RefSeq | NP_001046108.1 | 0 | 1 | 1009 | 1 | 963 | Os02g0184400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002438738.1 | 0 | 1 | 1009 | 1 | 1009 | hypothetical protein SORBIDRAFT_10g025240 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2r68_A | 0 | 226 | 704 | 31 | 462 | A Chain A, Pectate Lyase A31g/r236f From Xanthomonas Campestris |
| PDB | 2r66_A | 0 | 226 | 704 | 31 | 462 | A Chain A, Pectate Lyase A31g/r236f From Xanthomonas Campestris |
| PDB | 2r60_A | 0 | 226 | 704 | 31 | 462 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_H | 2e-35 | 178 | 701 | 261 | 765 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_G | 2e-35 | 178 | 701 | 261 | 765 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| sucrose biosynthesis | SUCROSE-PHOSPHATE-SYNTHASE-RXN | EC-2.4.1.14 | sucrose-phosphate synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CN131044 | 286 | 290 | 575 | 0 |
| GT047562 | 349 | 527 | 874 | 0 |
| GT043340 | 330 | 564 | 892 | 0 |
| GO868168 | 332 | 620 | 950 | 0 |
| GT033968 | 335 | 513 | 846 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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