y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb10g027270.1 |
Family | AA1 |
Protein Properties | Length: 547 Molecular Weight: 60697.8 Isoelectric Point: 8.7253 |
Chromosome | Chromosome/Scaffold: 10 Start: 57014635 End: 57018403 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 51 | 501 | 0 |
EGILINGQFPGPQIDAVTNDNIIVNVFNNLPVPFLLSWQGIQQRRSSWQDGVYGTNCPIPPGGNFTYNMQFKDQIGTYYYFPSLLFHKAAGGYGGIRVLS RPRIPVPFDPPAGDFTILAGDWFKLNHTDLKGILDSGNDLPLPDGLLINGQGWNGNRFTVDQGKTYRFRVSNVGIATSVNIRIQGHSMLLVEVEGSHTMQ STYTSIDIHLGQSYSFLVTADQPPADYSIIISTRFTTPVLTTTAILHYSNSNGAATVPPPAAPTVEIDFSLNQARSIRWNLTASGPRPNPQGSYHYGLVN TTRTIILANSRATINGKLRYAVNSISFIPADTPLKVADFYKIPGVFTLGSMPDNPTGGGAYLQTSVMAANMRDYVEIVFQNTENFVQSWHIDGYAFWVVG MDGGQWTPASRQGYNLRDAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSES |
Full Sequence |
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Protein Sequence Length: 547 Download |
MEPPSSPAPL FLVVLFLLGS LLLQARADDP YRFYTWNVTF GDIYPLGVKQ EGILINGQFP 60 GPQIDAVTND NIIVNVFNNL PVPFLLSWQG IQQRRSSWQD GVYGTNCPIP PGGNFTYNMQ 120 FKDQIGTYYY FPSLLFHKAA GGYGGIRVLS RPRIPVPFDP PAGDFTILAG DWFKLNHTDL 180 KGILDSGNDL PLPDGLLING QGWNGNRFTV DQGKTYRFRV SNVGIATSVN IRIQGHSMLL 240 VEVEGSHTMQ STYTSIDIHL GQSYSFLVTA DQPPADYSII ISTRFTTPVL TTTAILHYSN 300 SNGAATVPPP AAPTVEIDFS LNQARSIRWN LTASGPRPNP QGSYHYGLVN TTRTIILANS 360 RATINGKLRY AVNSISFIPA DTPLKVADFY KIPGVFTLGS MPDNPTGGGA YLQTSVMAAN 420 MRDYVEIVFQ NTENFVQSWH IDGYAFWVVG MDGGQWTPAS RQGYNLRDAI ARYTLQVYPQ 480 SWTAIYMPLD NVGMWNVRSE SWARQYLGQQ FYLRVYSPAN SWRDENPIPK NALLCGRASG 540 RRTRPL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 0 | 26 | 543 | 521 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 26 | 543 | 518 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 25 | 546 | 523 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 24 | 540 | 525 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 30 | 539 | 521 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ02087.1 | 0 | 26 | 546 | 21 | 542 | hypothetical protein OsI_24168 [Oryza sativa Indica Group] |
GenBank | EAZ38022.1 | 0 | 24 | 546 | 9 | 532 | hypothetical protein OsJ_22366 [Oryza sativa Japonica Group] |
RefSeq | NP_001058365.1 | 0 | 26 | 546 | 21 | 542 | Os06g0678800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147597.1 | 0 | 1 | 546 | 5 | 548 | LOC100281206 [Zea mays] |
RefSeq | XP_002438855.1 | 0 | 1 | 546 | 1 | 546 | hypothetical protein SORBIDRAFT_10g027270 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 536 | 4 | 539 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1asq_A | 0 | 32 | 536 | 4 | 539 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1asp_B | 0 | 32 | 536 | 4 | 539 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1asp_A | 0 | 32 | 536 | 4 | 539 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1aso_B | 0 | 32 | 536 | 4 | 539 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |