| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g027970.1 |
| Family | GT43 |
| Protein Properties | Length: 359 Molecular Weight: 40297.8 Isoelectric Point: 6.9229 |
| Chromosome | Chromosome/Scaffold: 10 Start: 57824763 End: 57828785 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT43 | 45 | 283 | 0 |
| LLHSLRNVPYPLTWIVVEAGGTTNATASMLARSGLTFVHIPFPDRMPHEWADRHATENRMRLHALRVIRERKMDGVVVFADDSNVHSMELFDEVQKVQWM GAVSVGILAHTGTADQLRLSEEDKQNMPLPVQGPACNSSGHLAGWHTFNSLPFSGKTATVVGEAAPVLPRGLEWAGFVLNSRMLWKEADGKPDWVKDLDA VGENGEEIENPLALLNDPSSVEPLGNCGKKVLLWWLRVE | |||
| Full Sequence |
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| Protein Sequence Length: 359 Download |
| MRAHRIMERV QEEQRRWYGV KEPRQVLVVT PTYSRAFQAL HLTGLLHSLR NVPYPLTWIV 60 VEAGGTTNAT ASMLARSGLT FVHIPFPDRM PHEWADRHAT ENRMRLHALR VIRERKMDGV 120 VVFADDSNVH SMELFDEVQK VQWMGAVSVG ILAHTGTADQ LRLSEEDKQN MPLPVQGPAC 180 NSSGHLAGWH TFNSLPFSGK TATVVGEAAP VLPRGLEWAG FVLNSRMLWK EADGKPDWVK 240 DLDAVGENGE EIENPLALLN DPSSVEPLGN CGKKVLLWWL RVEARADSKF PQGWVIEPPL 300 EVVVPAKRTP WPETTTELPS ELLDDKQEQE DRRLSRANKS SRPRGTTKRK ADPQGQEN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 4.0e-17 | 24 | 241 | 220 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 2.0e-45 | 45 | 284 | 247 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 4.0e-62 | 26 | 284 | 263 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84622.1 | 0 | 1 | 358 | 1 | 358 | unknown [Zea mays] |
| EMBL | CAI93187.1 | 0 | 1 | 354 | 170 | 525 | glycosyltransferase [Hordeum vulgare] |
| EMBL | CAI93190.1 | 0 | 1 | 358 | 174 | 531 | glycosyltransferase [Saccharum officinarum] |
| EMBL | CAI93192.1 | 0 | 1 | 352 | 170 | 523 | glycosyltransferase [Triticum aestivum] |
| RefSeq | XP_002437486.1 | 0 | 1 | 358 | 1 | 358 | hypothetical protein SORBIDRAFT_10g027970 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.00000000000001 | 26 | 283 | 5 | 234 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1v84_A | 0.00000000000001 | 26 | 283 | 5 | 234 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1v83_B | 0.00000000000001 | 26 | 283 | 5 | 234 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1v83_A | 0.00000000000001 | 26 | 283 | 5 | 234 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1v82_B | 0.00000000000001 | 26 | 283 | 5 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG376749 | 266 | 53 | 318 | 0 |
| FE630113 | 255 | 66 | 320 | 0 |
| FE629954 | 255 | 90 | 344 | 0 |
| EE045653 | 243 | 1 | 243 | 0 |
| EE155346 | 244 | 1 | 244 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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