y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb10g028060.1 |
Family | GH1 |
Protein Properties | Length: 481 Molecular Weight: 55321.7 Isoelectric Point: 6.961 |
Chromosome | Chromosome/Scaffold: 10 Start: 57966682 End: 57969975 |
Description | B-S glucosidase 44 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 44 | 479 | 0 |
RETFPPGFVFGTASSAYQVEGNTRKFGRGPSIWDTFLKYPGTTPDNATADVSVDEYDRYMDDVDNMVRVGFDAYRFSISWSRIFPSGIGRVNKDGVDYYH RLIDYMLANHITPYVVLYHYDLPQVLQDQYNGWLSPRIVPDFTAFADFCFKTYGDRVKFWFTINEPQMVASHGYGDAFFPPGRCTGCYFGGNSATEPYIA GHHLLLSHAAAVKLYREKYKVHQGGKIGILLDFVWYEPLTKSIEDEFAAHRARMFTLGWFLHPITYGHYPETMEKIVMGRLPNFTFEQSAMVKGSADYIA INHYTTYYASNFGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETLPHALYDKFRIDYFQKYLQELQYAIRDGANVFGYFVWSLLDNFEW RLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIKNE |
Full Sequence |
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Protein Sequence Length: 481 Download |
MASSAAAPWS LTLFFLPLCF LLVVSVALGA HDVNKPGGHY NLSRETFPPG FVFGTASSAY 60 QVEGNTRKFG RGPSIWDTFL KYPGTTPDNA TADVSVDEYD RYMDDVDNMV RVGFDAYRFS 120 ISWSRIFPSG IGRVNKDGVD YYHRLIDYML ANHITPYVVL YHYDLPQVLQ DQYNGWLSPR 180 IVPDFTAFAD FCFKTYGDRV KFWFTINEPQ MVASHGYGDA FFPPGRCTGC YFGGNSATEP 240 YIAGHHLLLS HAAAVKLYRE KYKVHQGGKI GILLDFVWYE PLTKSIEDEF AAHRARMFTL 300 GWFLHPITYG HYPETMEKIV MGRLPNFTFE QSAMVKGSAD YIAINHYTTY YASNFGYSDW 360 LYVVPWGLYK ALIWTKEKFN NPVMLIGENG IDQSGNETLP HALYDKFRID YFQKYLQELQ 420 YAIRDGANVF GYFVWSLLDN FEWRLGYTSR FGIVHVDRST FVRYPKDSAR WFRKVIKNED 480 * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 3.0e-116 | 42 | 472 | 463 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 8.0e-117 | 43 | 479 | 465 | + beta-glucosidase | ||
COG2723 | BglB | 5.0e-121 | 46 | 478 | 463 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-127 | 48 | 472 | 442 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 5.0e-162 | 43 | 478 | 465 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL37714.1 | 0 | 42 | 479 | 42 | 512 | AF403444_1 beta-mannosidase enzyme [Solanum lycopersicum] |
GenBank | ABC55717.1 | 0 | 8 | 479 | 3 | 500 | beta-mannosidase 2 [Oncidium Gower Ramsey] |
GenBank | EEC69164.1 | 0 | 11 | 479 | 1 | 491 | hypothetical protein OsI_38122 [Oryza sativa Indica Group] |
RefSeq | NP_001066656.1 | 0 | 16 | 479 | 3 | 491 | Os12g0420100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438912.1 | 0 | 1 | 480 | 1 | 480 | hypothetical protein SORBIDRAFT_10g028060 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rgm_B | 0 | 33 | 477 | 6 | 480 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 2rgm_A | 0 | 33 | 477 | 6 | 480 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 2rgl_B | 0 | 33 | 477 | 6 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2rgl_A | 0 | 33 | 477 | 6 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3f5l_B | 0 | 33 | 477 | 6 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |