| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g030870.1 |
| Family | GT8 |
| Protein Properties | Length: 698 Molecular Weight: 79791.2 Isoelectric Point: 8.9734 |
| Chromosome | Chromosome/Scaffold: 10 Start: 60525515 End: 60528704 |
| Description | galacturonosyltransferase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 345 | 669 | 0 |
| CLHMQLTTDYYFRDDATKEHFHAAALKAEQDKEKLEDRSLYHYAIFSDNVLAASVVVRSTVTNANEPEKHVFHIVTDRLNFAAMKMWFITHPPQLATVHV ENIDNFKWLNSSYCSVLRQLESARLKEYYFKAHDPSSLSDGNENLKYRNPKYLSMLNHLRFYMPEIHPKLEKILFLDDDVVVQKDLTPLWDIDLKGMVNG AVETCKESFHRFDTYLNFSHPKISENFDPHACGWAFGMNMFDLKEWKKRNITGIYHYWQDLNEDRKLWKLGTLPPGLITFYNLTYPLNRTWHVLGLGYDP AVDIAEIDNAAVVHYNGNYKPWLDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 698 Download |
| MASSSSSASS AAAAAAAAYP RTTLPLRRRP GLLVLLLILL CFLSFQVVIH VPAARSAVSQ 60 WLFSGHRADR GTRENCPGCS KLQDVDKAEK TIAYTDQHGR IKLFKVTARE FGSSSIWENP 120 WLPRDSQPVA GTQVAARDHL LASGSGTTNV SSAETLATTI VDPIKLRRQV FRRRRKERRV 180 QELLQMDKKV ELEMRNAAIN SSMNFNNKVR GSYNIWRQEF RFINTDSTLR LMKDQIIMAK 240 LYATIALSQK EPDMYALLMK CIKESQTSIG DALIDSELDS SALERAKAMG HVLSSARDVL 300 YSSGEVSRKL RAMLQSTELN IDAVKKQNSF LVQHAAKTVP MPLHCLHMQL TTDYYFRDDA 360 TKEHFHAAAL KAEQDKEKLE DRSLYHYAIF SDNVLAASVV VRSTVTNANE PEKHVFHIVT 420 DRLNFAAMKM WFITHPPQLA TVHVENIDNF KWLNSSYCSV LRQLESARLK EYYFKAHDPS 480 SLSDGNENLK YRNPKYLSML NHLRFYMPEI HPKLEKILFL DDDVVVQKDL TPLWDIDLKG 540 MVNGAVETCK ESFHRFDTYL NFSHPKISEN FDPHACGWAF GMNMFDLKEW KKRNITGIYH 600 YWQDLNEDRK LWKLGTLPPG LITFYNLTYP LNRTWHVLGL GYDPAVDIAE IDNAAVVHYN 660 GNYKPWLDLA ISKYKTYWSK YVDVDNSHVQ HCYEGKQ* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02718 | PLN02718 | 1.0e-162 | 187 | 692 | 510 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 0 | 94 | 692 | 609 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 226 | 692 | 467 | + Probable galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 0 | 223 | 692 | 472 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 0 | 264 | 692 | 429 | + galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB47337.1 | 0 | 13 | 697 | 5 | 686 | Glycosyltransferase QUASIMODO1, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY78177.1 | 0 | 13 | 697 | 5 | 677 | hypothetical protein OsI_33224 [Oryza sativa Indica Group] |
| GenBank | EAZ15816.1 | 0 | 13 | 697 | 5 | 690 | hypothetical protein OsJ_31235 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058636.1 | 0 | 24 | 697 | 61 | 697 | Os06g0727300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002439065.1 | 0 | 20 | 697 | 20 | 697 | hypothetical protein SORBIDRAFT_10g030870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.00008 | 493 | 666 | 75 | 252 | A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity |
| PDB | 1g9r_A | 0.00008 | 493 | 666 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.0001 | 493 | 666 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
