| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb10g031040.2 |
| Family | GT4 |
| Protein Properties | Length: 850 Molecular Weight: 97072.4 Isoelectric Point: 7.6612 |
| Chromosome | Chromosome/Scaffold: 10 Start: 60707758 End: 60712061 |
| Description | sucrose synthase 6 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 573 | 740 | 0 |
| DRNKPIIFSMARLDKVKNITGLVEWYGQNKRLRDLVNLVVVAGLLEASQSKDREEIEEINKMHSLIDMYQLKGQIRWIKAQTDRVRNGELYRCIADTKGA FVQPALYEAFGLTVIEAMNCGLTTFATNQGGPAEIIVDGVSGFHINPMNGREASNKIADFFQKCKEDP | |||
| Full Sequence |
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| Protein Sequence Length: 850 Download |
| MASKLSFKRT DSLAESMPDA LRQSRYQMKK CFQRYVSKGR RLLKNQQLIE ELEKSLDDKV 60 EKEKLVEGFL GYIICSTQEA VVLPPYVAFA VRMNPGIWEY VKVHSEDLSV EGITPSEYLK 120 FKETLYDENW AKDDNSLEVD FGALDLSTPH LTLPSSIGNG LQFVSKFMSS KLGDKPEISM 180 KPLLDYLLSL NYRGEKLMVN DTIDTVNKLQ TALLLAEVFV SGLPRYTPFL KFEQRFQEWG 240 LEKGWGDTAE RCKETLNCLS EVLQAPDPIN MEKFFSRVPS TFNIVIFSIH GYFGQEKVLG 300 LPDTGGQVVY ILDQVRALEE ELLQRIKLQG LNVTPKILVL TRLIPDAKGT KCNVELEPVE 360 NTKHSHILRV PFKTEDGKEL RQWVSRFDIY PYLERYAQDS CAKILDILEG KPDLIIGNYT 420 DGNLVASLMS SKLGVTQGTI AHALEKTKYE DSDVKWRDLD QKYHFSCQFT ADMIAMNTSD 480 FIITSTYQEI AGSKEKPGQY EHHYAFTMPG LCRYATGINV FDPKFNIAAP GADQSIYFPF 540 TQKQKRLTDL HPQIEELLYS KQDTNEHIGY LADRNKPIIF SMARLDKVKN ITGLVEWYGQ 600 NKRLRDLVNL VVVAGLLEAS QSKDREEIEE INKMHSLIDM YQLKGQIRWI KAQTDRVRNG 660 ELYRCIADTK GAFVQPALYE AFGLTVIEAM NCGLTTFATN QGGPAEIIVD GVSGFHINPM 720 NGREASNKIA DFFQKCKEDP SYWNKVSTAG LQRIYECYTW KIYATKVLNM GSTYGFWKTL 780 NKEERLAKQR YLQMFYNLQF RNLAKTVPRL FEHPPQALAG PSTMTVTRPK ERQVCPLLRT 840 LLKRDRGSN* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 4.0e-63 | 284 | 770 | 497 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 5.0e-114 | 283 | 768 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 1 | 816 | 816 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 25 | 809 | 785 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 9 | 560 | 552 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005985 | sucrose metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAE03896.2 | 0 | 1 | 847 | 1 | 848 | OSJNBb0026I12.4 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH66603.1 | 0 | 1 | 847 | 1 | 848 | H0211A12.6 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC76883.1 | 0 | 1 | 847 | 1 | 848 | hypothetical protein OsI_15088 [Oryza sativa Indica Group] |
| GenBank | EEE60617.1 | 0 | 1 | 833 | 1 | 826 | hypothetical protein OsJ_14034 [Oryza sativa Japonica Group] |
| RefSeq | NP_001052432.1 | 0 | 1 | 847 | 1 | 837 | Os04g0309600 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 9 | 808 | 10 | 803 | A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 |
| PDB | 3s29_G | 0 | 9 | 808 | 10 | 803 | A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 |
| PDB | 3s29_F | 0 | 9 | 808 | 10 | 803 | A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 |
| PDB | 3s29_E | 0 | 9 | 808 | 10 | 803 | A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 |
| PDB | 3s29_D | 0 | 9 | 808 | 10 | 803 | A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 804 | 9 | 812 | 0 |
| BU103683 | 811 | 7 | 817 | 0 |
| CX109054 | 602 | 104 | 705 | 0 |
| FG227316 | 455 | 281 | 735 | 0 |
| GO854345 | 322 | 29 | 350 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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