| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si000109m |
| Family | GT31 |
| Protein Properties | Length: 1150 Molecular Weight: 128012 Isoelectric Point: 6.7991 |
| Chromosome | Chromosome/Scaffold: 5 Start: 42841661 End: 42852245 |
| Description | mitotic checkpoint family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 821 | 1018 | 0 |
| KRRDSLRETWVPRGEKLRKLETEKGVVIRFVIGHSGAPGGGALDRALDAEEAETRDFLRLDHAEGYHELSSKTRIYFTTAVATWDADFYVKVDDDVHLNL GMLSSRLAKHRTRPRVYVGCMKSGPVLSQKGVKYHEPEYWKFGDEGNKYFRHATGQIYAISKDLAAYISINQPILHRFANEDVSLGAWLIGLEVEHVD | |||
| Full Sequence |
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| Protein Sequence Length: 1150 Download |
| MILRTPPQRK RRADTDNDAD LVVVKSGGGA SAAGRSPVSD RRMVLYDRPT ALVPAGAPGE 60 QFDDMVCTYH CRQMVKSEFV VALDTAEKQV QEYQTKIDAL EEQLSKSEDE RMQFLDKLNY 120 VEQELAATKG RESALQERLL KELSGYQERY HDQVQLNKEI DSRISAESSA SSAKESIKDL 180 EGNLQRLLES SEREKKTLKK ELSYMKEDLT LSASRLNVEL EKTRLKAENY ESEAELLNEQ 240 LVDLKKQLEE CLRERNEMEL KLLNSSALPG QHAPTDDQKL IKLLREELRN YEKEVHEARR 300 LKSSHTNVEL MKEKLLEEQG RRERAEQELS KLQEVEAKAH KLELELASCT ALLSNIPDVS 360 SYADIPQKIA DLQKQALTNL NKVGEVTSRL KELEVALEFA DLSKQRAEGE ANLAKERAES 420 AAKEVKRLEL MLAAISEERD KLRKEHAVEL DQSGMEKTIR ELESTIHEQK ELVSHKDTEL 480 NIMNERLNLE AKKVKSLERE GDQLRSQVAL LESKLGHGDY SASSTKVLRM VNTLAVDNEA 540 KQTIEALQAE LKKTKERLQA VEELKGQADA GTVVDANIAE KLAQLKNQIA TLEKREERYK 600 AVFAERISVF RKACCSLFGY KIVMNDQQQS NGIPVTRFIL QSVYAQSDDE KLEFDYESGS 660 TNIVVNDYTS QQEIAQQALT ERQPQLEKTK ALRARAPLSR KAVAALCVTS FVAGLLLSGR 720 VSLMSADASR DDGAKESVRA SGCAGNKRKL GESHPKDLLN EVSRTHQAIQ SLDKAVSTLE 780 MELAVERARS GAAGAGTAVP SKPPQKAFVV IGINTAFSSR KRRDSLRETW VPRGEKLRKL 840 ETEKGVVIRF VIGHSGAPGG GALDRALDAE EAETRDFLRL DHAEGYHELS SKTRIYFTTA 900 VATWDADFYV KVDDDVHLNL GMLSSRLAKH RTRPRVYVGC MKSGPVLSQK GVKYHEPEYW 960 KFGDEGNKYF RHATGQIYAI SKDLAAYISI NQPILHRFAN EDVSLGAWLI GLEVEHVDDR 1020 SMCCATPPAG FCCNGEPSSV SSVGQIASGR SGPGTCAWRP STGRAVASAS RWTGCGTSTR 1080 PAAKAKGPSG TSPYDDWPSQ LSSKSSLFVW MDLHLLGVQF GPLFSMKHSA LRSLLHLASM 1140 AVSFETAML* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02168 | SMC_prok_B | 8.0e-11 | 180 | 519 | 352 | + chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]. | ||
| pfam13334 | DUF4094 | 2.0e-24 | 699 | 788 | 91 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
| pfam01762 | Galactosyl_T | 1.0e-39 | 821 | 1020 | 206 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| pfam05557 | MAD | 3.0e-76 | 82 | 677 | 672 | + Mitotic checkpoint protein. This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated. | ||
| PLN03193 | PLN03193 | 1.0e-135 | 694 | 1028 | 349 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| GO:0016032 | viral reproduction |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL53751.1 | 0 | 675 | 1028 | 7 | 363 | unknown [Zea mays] |
| RefSeq | NP_001044974.1 | 0 | 680 | 1028 | 7 | 359 | Os01g0877400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149873.1 | 0 | 675 | 1028 | 7 | 366 | beta-1,3-galactosyltransferase sqv-2 [Zea mays] |
| RefSeq | NP_001151757.1 | 0 | 1 | 678 | 1 | 688 | LOC100285392 [Zea mays] |
| RefSeq | XP_002456730.1 | 0 | 1 | 1142 | 1 | 1136 | hypothetical protein SORBIDRAFT_03g041540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dzo_B | 0.0001 | 579 | 660 | 3 | 76 | A Chain A, Structure Of Human Mad1 C-Terminal Domain Reveals Its Involvement In Kinetochore Targeting |
| PDB | 4dzo_A | 0.0001 | 579 | 660 | 3 | 76 | A Chain A, Structure Of Human Mad1 C-Terminal Domain Reveals Its Involvement In Kinetochore Targeting |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR813135 | 320 | 334 | 653 | 0 |
| JG951668 | 299 | 379 | 677 | 0 |
| FL809509 | 268 | 746 | 1013 | 0 |
| GO839110 | 317 | 376 | 675 | 0 |
| JG916115 | 297 | 259 | 555 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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