y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000291m |
Family | GH35 |
Protein Properties | Length: 848 Molecular Weight: 93887.8 Isoelectric Point: 6.9973 |
Chromosome | Chromosome/Scaffold: 5 Start: 42748221 End: 42754650 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 343 | 0 |
LIIAGRRRLLISTAIHYPRSVPEMWPKLVAEAKDGGADCIETYVFWNGHEIAPGQYYFEDRFDLVRFVKVVKDAGLLLILRIGPFVAAEWNFGGVPVWLH YVPGTVFRTSNEPFKSHMQSFTTYIVNMMKKEQLFASQGGNIILAQIENEYGDYYEQSYGPGGKAYAMWAASMAVAQNTGVPWIMCQESDAPDPVINTCN GFYCDTFQPNSPTKPKMWTENWPGWFQTFGESNPHRPPEDVAFAVARFFEKGGSVQNYYMYHGGTNFGRTTGGPFITTSYDYDAPIDEYGLRRFPKWAHL RELHK |
Full Sequence |
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Protein Sequence Length: 848 Download |
MAAAAAASSS ALPCLLLLML LLLPSLDAAS NVTYDHRSLI IAGRRRLLIS TAIHYPRSVP 60 EMWPKLVAEA KDGGADCIET YVFWNGHEIA PGQYYFEDRF DLVRFVKVVK DAGLLLILRI 120 GPFVAAEWNF GGVPVWLHYV PGTVFRTSNE PFKSHMQSFT TYIVNMMKKE QLFASQGGNI 180 ILAQIENEYG DYYEQSYGPG GKAYAMWAAS MAVAQNTGVP WIMCQESDAP DPVINTCNGF 240 YCDTFQPNSP TKPKMWTENW PGWFQTFGES NPHRPPEDVA FAVARFFEKG GSVQNYYMYH 300 GGTNFGRTTG GPFITTSYDY DAPIDEYGLR RFPKWAHLRE LHKSIKLCEH ALLYGNTTFL 360 SLGPKQEADI YTDRSGGCVA FLANIDPEKD KIVTFNNRKY DLPAWSVSIL PDCKNVVFNT 420 AKVQSQTSMV TMVPESLQAS KSDRWSIFRE RTGIWGKNDF VQNGFVDHIN TTKDSTDYLW 480 YTTSFSVDGS YPSKGSHAVL NIDSKGHGVH AFLNNEFIGS AYGNGSKSSF TVELPINLRT 540 GKNELALLSM TVGLQNAGPS YEWIGAGFTN VNISGLKNGA IDLSSNNWAY KIGLEGEYYS 600 LFKPDQRSNK RWIPQSEPPK NQPLTWYKVN VDVPQGDDPV GIDMQSMGKG LAWLNGNAIG 660 RYWPRTSSSD DRCTPSCNYR GAFNPDKCRT GCGQPTQRWY HVPRSWFHPS ENTLVVFEEK 720 GGDPTKITFS RRVVSSVCSF VSEHYPSIDL ESWDKSITND ATAAAKVQLS CPKGKNISSV 780 KFASLGNPSG TCRSYQKGSC HHPNSLSVVE KACLNTNSCA VSLSDGGFGE DLCPGVTKTL 840 AVEADCS* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13364 | BetaGal_dom4_5 | 4.0e-5 | 466 | 547 | 83 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
COG1874 | LacA | 5.0e-16 | 32 | 335 | 355 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 6.0e-20 | 769 | 846 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-147 | 38 | 345 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 31 | 847 | 822 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG95687.1 | 0 | 28 | 847 | 102 | 919 | unnamed protein product [Oryza sativa Japonica Group] |
GenBank | EEC71891.1 | 0 | 30 | 847 | 36 | 851 | hypothetical protein OsI_04635 [Oryza sativa Indica Group] |
RefSeq | NP_001044964.1 | 0 | 28 | 847 | 34 | 851 | Os01g0875500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151478.1 | 0 | 25 | 847 | 22 | 844 | beta-galactosidase [Zea mays] |
RefSeq | XP_002456725.1 | 0 | 25 | 847 | 22 | 843 | hypothetical protein SORBIDRAFT_03g041450 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3.00018e-42 | 38 | 590 | 14 | 598 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.01 | 510 | 663 | 410 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 3e-35 | 41 | 328 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 3e-35 | 41 | 328 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |