Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000314m |
Family | GH3 |
Protein Properties | Length: 828 Molecular Weight: 88465.5 Isoelectric Point: 5.6706 |
Chromosome | Chromosome/Scaffold: 5 Start: 2794138 End: 2797061 |
Description | beta-xylosidase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 103 | 363 | 0 |
GAARVGLPPYKWWGEALHGVSDVGPGGTWFGDVVPGATSFPLVINSAAAFNESLWRAIGGAVSTEIRAMYNLGHAELTYWSPNINVVRDPRWGRASETPG EDPFLVGRYAVNFVRGMQDVSTGAVAAGERDPFSRPIKVSSCCKHFAAYDVDAWFDADRLTFDARVQERDMVETFERPFEMCIRDGDASCVMCSYNRVNG IPACADARLLSETVRGQWQLHGYIVSDCDSVRVMVRDAKWLNFTGVEATAAAMKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 828 Download |
MASASSSFRR FPPALLAALL CAIIAAASPA AAGAGAGGRG PITTNGRNYT KVCDPARFAA 60 LGLDMSRFRY CDASLPYGDR VRDLVGQLTL EEKVRNLGDK AEGAARVGLP PYKWWGEALH 120 GVSDVGPGGT WFGDVVPGAT SFPLVINSAA AFNESLWRAI GGAVSTEIRA MYNLGHAELT 180 YWSPNINVVR DPRWGRASET PGEDPFLVGR YAVNFVRGMQ DVSTGAVAAG ERDPFSRPIK 240 VSSCCKHFAA YDVDAWFDAD RLTFDARVQE RDMVETFERP FEMCIRDGDA SCVMCSYNRV 300 NGIPACADAR LLSETVRGQW QLHGYIVSDC DSVRVMVRDA KWLNFTGVEA TAAAMKAGLD 360 LDCGMFWEGA RDFFTTYGVD AVRQGKIKEA DVDNALTNVY LTLMRLGFFD GMPEFESLGA 420 GDVCTEEHKE LAADAARQGM ILLKNDARRL PLDPNRINSV SLVGLLEHIN ATDVMLGDYR 480 GKPCRVVTPY NAIRKMVNAT YVHACDNGGC DTAEGMGRAA RTAKLGDTTI VIAGLNMSVE 540 RESNDREDLL LPWNQTTWIS AVAEASPHPI VLVIMSAGGV DVSFAQSNPK IGAIVWAGYP 600 GEEGGTAIAD VLFGKHNPGG RLPLTWFKNE YVNQIPMTSM ALRPDAAHGY PGRTYKFYGG 660 PAVLYPFGHG LSYTTFSYAS ATAGATVTVP IGAWEHCKTL TYKAGAAPSP PPACPALNVA 720 SHRCDEVVSF AVTVRNTGGV GGGHVVPVYT APPAEVGDAP LKQLVAFRRV FVPAGAVVEV 780 PFTLNVCRDF AIVEETAYTV VPAGASAVIV GDDALALSFA VTINLAA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 4.0e-42 | 103 | 483 | 385 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-49 | 82 | 400 | 336 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-54 | 440 | 675 | 242 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-61 | 134 | 677 | 588 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 66 | 818 | 759 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB55751.1 | 0 | 3 | 827 | 2 | 816 | putative alpha-L-arabinofuranosidase/beta-D- xylosidase isoenzyme ARA-I [Oryza sativa Japonica Group] |
GenBank | EEE54394.1 | 0 | 3 | 827 | 2 | 774 | hypothetical protein OsJ_01415 [Oryza sativa Japonica Group] |
RefSeq | NP_001146482.1 | 0 | 41 | 826 | 51 | 834 | hypothetical protein LOC100280070 [Zea mays] |
RefSeq | XP_002437062.1 | 0 | 42 | 826 | 35 | 808 | hypothetical protein SORBIDRAFT_10g020500 [Sorghum bicolor] |
RefSeq | XP_002455502.1 | 0 | 1 | 826 | 1 | 824 | hypothetical protein SORBIDRAFT_03g012290 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 4.2039e-45 | 182 | 784 | 128 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3u48_A | 4.2039e-45 | 182 | 784 | 128 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3u4a_B | 1.96182e-44 | 182 | 784 | 128 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3u4a_A | 1.96182e-44 | 182 | 784 | 128 | 696 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 2x41_A | 1e-39 | 79 | 825 | 2 | 713 | A Chain A, Arabidopsis Thaliana Peroxidase N |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |