Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000317m |
Family | GH35 |
Protein Properties | Length: 826 Molecular Weight: 91581.7 Isoelectric Point: 6.3456 |
Chromosome | Chromosome/Scaffold: 5 Start: 32129049 End: 32134689 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 32 | 334 | 0 |
VVNGQRRILLSGSIHYPRSVPEMWPDLIQKAKDGGLDVVQTYVFWNGHEPSPGQYYFEGRYDLVHFIKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKY VPGIRFRTDNEPFKSEMQKFTTKIVDMMKSEGLFEWQGGPIILSQIENEFGPLEWDQGEPAKAYASWAANMAVALNTGVPWIMCKEDDAPDPIINTCNGF YCDWFSPNKPHKPTMWTEAWTAWYTGFGIPVPHRPVEDLAYGVAKFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEYGLLREPKWGHLKE LHK |
Full Sequence |
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Protein Sequence Length: 826 Download |
MAPPAFAYAA VAVAVLAAAA SAAVTYDRKA VVVNGQRRIL LSGSIHYPRS VPEMWPDLIQ 60 KAKDGGLDVV QTYVFWNGHE PSPGQYYFEG RYDLVHFIKL VKQAGLYVHL RIGPYVCAEW 120 NFGGFPVWLK YVPGIRFRTD NEPFKSEMQK FTTKIVDMMK SEGLFEWQGG PIILSQIENE 180 FGPLEWDQGE PAKAYASWAA NMAVALNTGV PWIMCKEDDA PDPIINTCNG FYCDWFSPNK 240 PHKPTMWTEA WTAWYTGFGI PVPHRPVEDL AYGVAKFIQK GGSFVNYYMY HGGTNFGRTA 300 GGPFIATSYD YDAPIDEYGL LREPKWGHLK ELHKAIKLCE PALVAGDPIV TSLGNAQQAS 360 VFRSSTGACV AFLENKDKVS YARVAFNGMH YGLPPWSISI LPDCKTTVYN TARVGSQISQ 420 MKMEWAGGLT WQSYNEDINS LGEESFTTIG LLEQINVTRD KTDYLWYTTY VEIAQDEQFL 480 SNGKNPTLTV MSAGHALHIF INGQLTGTVY GNVEDPRLTY RGSVKLWPGS NTVSCLSIAV 540 GLPNVGEHFE TWNAGILGPV TLDGLNEGRR DLTWQKWTYQ VGLKGETLSL HSLSGSSSVE 600 WGEPVQKQPL TWYKAFFNAP DGDEPLALDM SSMGKGQIWI NGQGIGRYWP GYKASGTCGN 660 CDYRGEYDEK KCQTNCGDSS QRWYHVPRSW LNPTGNLLVI FEEWGGDPTG ISMVKRTTGS 720 ICADVSEWQP SMKSWHTKDY EKAKVHLQCD HGRKITEIKF ASFGTPQGSC GSYSEGTCHA 780 HKSYDIFLKN CIGQERCGVS VVPDVFGGDP CPGTMKRAVV EAICG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-5 | 47 | 182 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 8.0e-21 | 747 | 824 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-23 | 26 | 326 | 350 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-163 | 32 | 336 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 25 | 824 | 810 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC70952.1 | 0 | 27 | 825 | 26 | 822 | hypothetical protein OsI_02561 [Oryza sativa Indica Group] |
GenBank | EEE54862.1 | 0 | 27 | 825 | 29 | 839 | hypothetical protein OsJ_02342 [Oryza sativa Japonica Group] |
RefSeq | NP_001043405.1 | 0 | 27 | 825 | 29 | 827 | Os01g0580200 [Oryza sativa (japonica cultivar-group)] |
Swiss-Prot | P45582 | 0 | 25 | 824 | 28 | 831 | BGAL_ASPOF RecName: Full=Beta-galactosidase; Short=Lactase; Flags: Precursor |
RefSeq | XP_002455836.1 | 0 | 41 | 825 | 1 | 785 | hypothetical protein SORBIDRAFT_03g025990 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.8026e-45 | 28 | 332 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.000002 | 481 | 649 | 393 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-39 | 24 | 340 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-39 | 24 | 340 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |