Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000492m |
Family | AA1 |
Protein Properties | Length: 709 Molecular Weight: 77941.6 Isoelectric Point: 7.1118 |
Chromosome | Chromosome/Scaffold: 5 Start: 40390101 End: 40393102 |
Description | laccase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 164 | 694 | 0 |
AEVHHHEFVVQETPVKRLCKTHNIITVNGQFPGPTLEVREGDTLVINVVNRAQYDVTIHWHGIRQLRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGT LWWHAHSSWLRATVYGALIIRPRENKTYPFEKPSREVPVILGEWWNANPVDVIREAQRTGGAPNVSDAFTINGQPGDFLKCSEKETTAIPVKPGETALLR FINAALNHELFVTIAQHKMTVVAADASYTKPFTTSVLMIAPGQTTDVLVTMDQAPTRYYVAARAYVSGQNVAFDNTTTTAVIEYDCGCASDFGPKIQPAF PALPAFNDTAAATAFAAGIKSPDRVKVHENVDEYLFFTVGLGLFNCKPGELCAGPNNNTRFTASMNNVSFVFPKKDSLLHAHYYKVPGVFTTDFPAYPPV QFDYTAKNVSQALWQPVPATKLYPLRFGSVVQLVLQDTSIVTPENHPIHIHGYDFFILAEGFGNFDPKKDVEKFNYVDPPQRNTVAVPVNGWTVIQFVAD NPGVWLMHCHLDVHINWGLAMAFLVEDGYGE |
Full Sequence |
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Protein Sequence Length: 709 Download |
MDANAGAFYR RLNARIDRRK SSEVDADEIT EGADSRKLGG SAAPAEACGR RAALCPARGI 60 AAPKGAGQWV HQTICTQLND HTATTHEISS ELQALALRWI GWLQLQATLQ PKATSYSRTR 120 LSSIGARKTT SSTLRQHSLG AMASPPSRML ILLSCLALSL LAGAEVHHHE FVVQETPVKR 180 LCKTHNIITV NGQFPGPTLE VREGDTLVIN VVNRAQYDVT IHWHGIRQLR TGWADGPEFV 240 TQCPIKPGGS YKYRFTIEGQ EGTLWWHAHS SWLRATVYGA LIIRPRENKT YPFEKPSREV 300 PVILGEWWNA NPVDVIREAQ RTGGAPNVSD AFTINGQPGD FLKCSEKETT AIPVKPGETA 360 LLRFINAALN HELFVTIAQH KMTVVAADAS YTKPFTTSVL MIAPGQTTDV LVTMDQAPTR 420 YYVAARAYVS GQNVAFDNTT TTAVIEYDCG CASDFGPKIQ PAFPALPAFN DTAAATAFAA 480 GIKSPDRVKV HENVDEYLFF TVGLGLFNCK PGELCAGPNN NTRFTASMNN VSFVFPKKDS 540 LLHAHYYKVP GVFTTDFPAY PPVQFDYTAK NVSQALWQPV PATKLYPLRF GSVVQLVLQD 600 TSIVTPENHP IHIHGYDFFI LAEGFGNFDP KKDVEKFNYV DPPQRNTVAV PVNGWTVIQF 660 VADNPGVWLM HCHLDVHINW GLAMAFLVED GYGELQSLEP PPVDLPMC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 5.0e-57 | 172 | 287 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 6.0e-68 | 182 | 686 | 544 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-72 | 164 | 691 | 568 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-87 | 182 | 686 | 547 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 164 | 708 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28316.1 | 0 | 164 | 708 | 27 | 571 | unknown [Zea mays] |
GenBank | EEC71732.1 | 0 | 154 | 708 | 14 | 599 | hypothetical protein OsI_04280 [Oryza sativa Indica Group] |
RefSeq | NP_001044679.1 | 0 | 158 | 708 | 18 | 567 | Os01g0827300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148479.1 | 0 | 155 | 708 | 16 | 572 | L-ascorbate oxidase [Zea mays] |
RefSeq | XP_002456566.1 | 0 | 165 | 708 | 26 | 568 | hypothetical protein SORBIDRAFT_03g038550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 164 | 686 | 1 | 521 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1asq_A | 0 | 164 | 686 | 1 | 521 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1asp_B | 0 | 164 | 686 | 1 | 521 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1asp_A | 0 | 164 | 686 | 1 | 521 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 1aso_B | 0 | 164 | 686 | 1 | 521 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FF341475 | 261 | 165 | 425 | 0 |
DV515104 | 246 | 164 | 409 | 0 |
HO797675 | 501 | 211 | 709 | 0 |
EC896765 | 238 | 164 | 401 | 0 |
FL873478 | 258 | 262 | 519 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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