Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000575m |
Family | GH3 |
Protein Properties | Length: 670 Molecular Weight: 72831.6 Isoelectric Point: 6.6923 |
Chromosome | Chromosome/Scaffold: 5 Start: 38153181 End: 38157298 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 104 | 339 | 0 |
LSTRLGIPMIYGIDAVHGNNNVYNATLFPHNVGLGATRDPDLIKRIGEATALEVRATGIQYTFAPCIAVCRDPRWGRCYESYSEDHTVVQQMTDIILGLQ GEIPVNHTKGVPYVAGKDKVAACAKHFVGDGGTHNGINENNTIIDEHGLLSIHMPPYYDSIIKGVATIMVSYSSLNGVKMHANHDLVTGYLKSKLHFRGF VISDWLGIDRITSPPGENYTYSVQAGINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 670 Download |
MTSSNTSWAC LLLLCFASIG NAEYMKYKDP KQPINTRIKD LIGRMTLAEK IGQMTQIERQ 60 VASADVMKKY FIGSILSGGG SVPAPQASPS IWVSMVNEFQ KGALSTRLGI PMIYGIDAVH 120 GNNNVYNATL FPHNVGLGAT RDPDLIKRIG EATALEVRAT GIQYTFAPCI AVCRDPRWGR 180 CYESYSEDHT VVQQMTDIIL GLQGEIPVNH TKGVPYVAGK DKVAACAKHF VGDGGTHNGI 240 NENNTIIDEH GLLSIHMPPY YDSIIKGVAT IMVSYSSLNG VKMHANHDLV TGYLKSKLHF 300 RGFVISDWLG IDRITSPPGE NYTYSVQAGI NAGIDMVMVP YNYTDYIDDL TSLVHKGIVN 360 MNRIDDAVRR ILRVKFTMGL FENPLADLSF ADQLGKKEHR ELAREAVRKS LVLLKNGNPP 420 NQQFLPLPKK ARRILVAGSH ASNLGYQCGG WSIQWMGSSG DITTGTTILD AIKSTVADST 480 PVVYSENPDE SFMKHNDFSF AIVVVGEPPY SETVGDSTDL TILDPGPDTI RTVCSAVKCV 540 VVIVSGRPVV IEPYVPLMEA LVAAWLPGTE GQGVADVLFG DYGFTGKLPR TWFKSVDQLP 600 MNVGDPHYDP LYPFGFGLAI NSSLPGFSGV DSLGHAKQRV IYVVLGSLLS LVLINDLSTG 660 LFQHPAALL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-37 | 411 | 620 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 9.0e-38 | 5 | 619 | 701 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 3.0e-80 | 8 | 619 | 695 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-86 | 45 | 454 | 420 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-94 | 46 | 374 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAR14129.1 | 0 | 1 | 618 | 1 | 618 | exo-beta-glucanase [Lilium longiflorum] |
GenBank | EEC71555.1 | 0 | 1 | 662 | 378 | 1030 | hypothetical protein OsI_03907 [Oryza sativa Indica Group] |
GenBank | EEE55456.1 | 0 | 25 | 662 | 1 | 628 | hypothetical protein OsJ_03617 [Oryza sativa Japonica Group] |
RefSeq | NP_001044387.1 | 0 | 1 | 662 | 1 | 663 | Os01g0771900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002456420.1 | 0 | 1 | 655 | 21 | 675 | hypothetical protein SORBIDRAFT_03g035970 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 23 | 623 | 1 | 602 | E Chain E, Crystal Structure Of Mad1-Mad2 Reveals A Conserved Mad2 Binding Motif In Mad1 And Cdc20. |
PDB | 1iex_A | 0 | 23 | 623 | 1 | 602 | E Chain E, Crystal Structure Of Mad1-Mad2 Reveals A Conserved Mad2 Binding Motif In Mad1 And Cdc20. |
PDB | 1iew_A | 0 | 23 | 623 | 1 | 602 | E Chain E, Crystal Structure Of Mad1-Mad2 Reveals A Conserved Mad2 Binding Motif In Mad1 And Cdc20. |
PDB | 1iev_A | 0 | 23 | 623 | 1 | 602 | E Chain E, Crystal Structure Of Mad1-Mad2 Reveals A Conserved Mad2 Binding Motif In Mad1 And Cdc20. |
PDB | 1ieq_A | 0 | 23 | 623 | 1 | 602 | E Chain E, Crystal Structure Of Mad1-Mad2 Reveals A Conserved Mad2 Binding Motif In Mad1 And Cdc20. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |