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Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000871m |
Family | GT61 |
Protein Properties | Length: 560 Molecular Weight: 61783.3 Isoelectric Point: 10.3031 |
Chromosome | Chromosome/Scaffold: 5 Start: 6850181 End: 6852971 |
Description | Glycosyltransferase family 61 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT61 | 190 | 427 | 0 |
RPIICQMSGDVRVSPGSSSVALTMPMQQGVEGRRVRPYARRDDSLLPLVKEVDIRAAASENDAPRCSINHDVPAVVFSVGGYTGNFFHDVSDVLIPLYLT SFRFKGRVKFFITNYKQWWIQKYKPMLRRLSHYDIIDFDSNKDVHCFEQVIVGLVRDRDLILRPHPTRNPQGYSMLDFTRFLRHSYGLKRARPLVLGGEP GKKPRMLIISRRGTRKLLNLRQLAAISRALGFDVTVSE |
Full Sequence |
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Protein Sequence Length: 560 Download |
MAFMVQHGKS RAAVAAAAAR ERKPRPGTRA AAAAKSPAKP RQLAGRLLLA ACLLAPLLCI 60 CAARLLSPLS SRVSSGDGVY LAEGNYVISS EDAEGAGALN SFQQGIVDGH GPPGPIAPVP 120 ARFGADPVRS LDTGVENSNA ENRTDFDNKS GIERKTASSA KSVTDIEAPK PKSKIYCDDK 180 GKDEGFPYAR PIICQMSGDV RVSPGSSSVA LTMPMQQGVE GRRVRPYARR DDSLLPLVKE 240 VDIRAAASEN DAPRCSINHD VPAVVFSVGG YTGNFFHDVS DVLIPLYLTS FRFKGRVKFF 300 ITNYKQWWIQ KYKPMLRRLS HYDIIDFDSN KDVHCFEQVI VGLVRDRDLI LRPHPTRNPQ 360 GYSMLDFTRF LRHSYGLKRA RPLVLGGEPG KKPRMLIISR RGTRKLLNLR QLAAISRALG 420 FDVTVSEARG NLKKFATMVN SCDVLLAVHG AGLTNQIFLP AKAVVIQIVP WGKMGWMATN 480 FYGEPARGMN LRYLEYHISE QESSLAQRYP RDHMVFKDPM AIHGQGWNAL ANIFMAQDVK 540 LNLRRFRPTL LQALDLLQL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR04106 | cas_GSU0052 | 0.008 | 307 | 383 | 77 | + CRISPR-associated protein GSU0052/csb3, Dpsyc system. This model describes a CRISPR-associated (cas) protein unique to the Dpsyc subtype (named for Desulfotalea psychrophila), although not universal to the that subtype. Members of this family occur in CRISPR loci of Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, Rhodospirillum centenum SW, Planctomyces limnophilus DSM 3776, and Methylosinus trichosporium OB3b. | ||
COG4421 | COG4421 | 3.0e-5 | 367 | 470 | 106 | + Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] | ||
pfam04577 | DUF563 | 7.0e-16 | 273 | 470 | 203 | + Protein of unknown function (DUF563). Family of uncharacterized proteins. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD52573.1 | 0 | 136 | 558 | 157 | 602 | putative HGA6 [Oryza sativa Japonica Group] |
DDBJ | BAF03775.2 | 0 | 101 | 558 | 75 | 559 | Os01g0118600 [Oryza sativa Japonica Group] |
GenBank | EEC69831.1 | 0 | 101 | 491 | 75 | 492 | hypothetical protein OsI_00153 [Oryza sativa Indica Group] |
RefSeq | NP_001041861.1 | 0 | 6 | 558 | 37 | 603 | Os01g0118600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002455299.1 | 0 | 1 | 549 | 1 | 558 | hypothetical protein SORBIDRAFT_03g008000 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG937268 | 267 | 230 | 496 | 0 |
JG964607 | 236 | 230 | 465 | 0 |
JG906595 | 223 | 327 | 549 | 0 |
DR961853 | 298 | 241 | 538 | 0 |
CA170007 | 220 | 277 | 496 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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